Ictalurus punctatus (channel catfish): 108271417
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Entry
108271417 CDS
T04658
Name
(RefSeq) xyloside xylosyltransferase 1
KO
K23800
xylosyl alpha-1,3-xylosyltransferase [EC:
2.4.2.62
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00514
Other types of O-glycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
108271417
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ipu01003
]
108271417
Enzymes [BR:
ipu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.62 xylosyl alpha-1,3-xylosyltransferase
108271417
Glycosyltransferases [BR:
ipu01003
]
Glycan extension
O-Glycan
108271417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Mt_ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
108271417
NCBI-ProteinID:
XP_017334499
Ensembl:
ENSIPUG00000008603
UniProt:
A0A2D0RX22
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All DBs
Position
10:complement(8244928..8285849)
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AA seq
385 aa
AA seq
DB search
MFGAMGILRVLSYTVARISTFRPHQFALLLAAALAVMAFYYLGSEKQNFSSTTKRIKETQ
ASLNSNRNDADLSVDTRNAHHEENRAGRLQTYHALMMFTKINTSQTMQSKFEVAMRSMAR
YGRFREDEILLLHYVSDGGSKELAMRMLPELLRDATFQYEVVFHDVNGLTEKLFPIVEAM
QKHFSAGSGAYYSDAIFFLSVAMHRIMPTEMKRIVQLDLDLKYRTNIRDLFQQFKQFPPE
AVIGIVREMQPVYRHTFWQYRKENPKSRVGDPPPDGLPGFNSGVMLLNLETMRRSALYNR
LLEPEHVAHLTEKYHFRGHLGDQDFFTMIGMEHPELFHHLDCGWNRQLCTWWRDHGYGDV
FHLYFHCDGPVHIYHGNCNTPIPAD
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtttggagccatgggcattttgcgtgtgctttcatacactgttgcgagaatcagcacc
ttcagaccccatcagtttgctctgctccttgctgcagccctggctgtgatggctttctac
tacttgggttcagaaaaacagaacttctccagcaccaccaagcgaatcaaggagacgcag
gcgagtctcaactccaaccgcaacgacgctgacctctcggtggacaccagaaatgcacat
cacgaggagaaccgagcaggaagattacagacctaccacgctctcatgatgttcactaag
attaacacgagccaaacgatgcagagcaagtttgaggtggccatgcgctccatggcaaga
tacggccgtttccgagaggatgaaattctgcttcttcattatgtctctgacggaggcagt
aaggagctggccatgaggatgcttcctgagctgctgcgtgatgcgacgtttcagtacgag
gtggtgtttcatgatgttaatggtctgacagagaaactcttccctattgtggaggccatg
cagaagcatttcagtgcaggctctggggcctattacagtgatgccatcttctttctttct
gtagccatgcatcgcattatgcctacagagatgaaacgtatcgtgcagttggacttggat
ctcaagtacaggactaacattcgagacctgttccaacagttcaagcagttccctcctgaa
gcggtgatcggaatcgtccgagagatgcagccagtgtacagacacaccttctggcagtat
cgcaaggaaaaccccaaatcccgtgtgggcgatccccctcccgatggcctgcccgggttc
aacagcggtgtgatgctgctgaatctggagacaatgcgtcgctctgcgctctacaaccgc
ctccttgagcctgaacatgtcgcccatctcactgaaaaatatcacttccggggccacctg
ggcgatcaggacttcttcaccatgatcggcatggagcatccagagctcttccaccacctt
gactgtggctggaaccgccaactgtgcacctggtggagggaccacggctatggagatgta
tttcatctgtacttccactgcgatggacccgtgcacatttaccatggaaactgcaacact
cctatacccgctgactga
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