Ictalurus punctatus (channel catfish): 108271497
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Entry
108271497 CDS
T04658
Symbol
grik2
Name
(RefSeq) glutamate receptor ionotropic, kainate 2 isoform X1
KO
K05202
glutamate receptor, ionotropic kainate 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108271497 (grik2)
04082 Neuroactive ligand signaling
108271497 (grik2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108271497 (grik2)
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Glutamate (ionotropic)
108271497 (grik2)
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
YebG
Motif
Other DBs
NCBI-GeneID:
108271497
NCBI-ProteinID:
XP_017334601
Ensembl:
ENSIPUG00000014117
UniProt:
A0A2D0RWN9
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Position
1:19865764..20027310
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AA seq
915 aa
AA seq
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MYIAGIMKITSPLITHASFRRSVKILLLLLLCVGYSRGMPHVLRFGGIFESIETGPSGAE
ELAFKFALNTINRNRTLLPNTTLTYDIQRINIHDSFEASRKACDQLSLGVAAIFGPSHSS
SANAVQSICNALGVPHIQTKWKHQVSDNRDSFYVSLYPDFSSLSRAILDLVHFFKWRMVT
VVYDDSTGLIRLQELIKAPSRYNIRLKIRQLPAETKDTKPLLKEMKRGKEFHVIFDCGHE
MAATILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMSGFRILNTENSQVSSII
EKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAVHVVAVAVQQSPQITVSSLQCNRHKPW
RFGNRFMTLIKEAHWDGLTGRINFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPVSGLNM
TENQKGKMSNITDSLTNRTLYVSTILEEPYVMFKKSDKPLHGNDRFEGYCIDLLRELAHI
LGFIYEVRLVEDGKYGAQEESTGQWNGLVRELMDHKADLAVAPLAITYVREKVIDFSKPF
MTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPH
PCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTA
NLAAFLTVERMESPIDSADDLAKQTKIEYGVVEDGSTMTFFKKTKISTYDKMWEFMSSRR
HSVMVKSVEEGIQRVLTSDYAFLMESTTIEYVTQRNCNLTQIGGLIDSKSYGVGTPMGSP
YRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEESKEASALGVQNIGGIFIVLAAGLVL
SVFVAVGEFLYKSKQNAQLEKRSFCSAMMEELRVSLKCQRRLKHKPQPPVMVKTEEVINM
HTFNDRRLPGKETMA
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgtacattgcaggcatcatgaagattacctccccgttgataactcatgcgagcttcagg
cgatccgtcaagatccttctgctgcttctgttatgtgtgggatactctcgcgggatgcca
catgttttaagattcggggggatatttgaatccattgaaactgggccatctggtgctgag
gaactagcctttaaatttgctttaaatacaatcaacagaaacagaaccctactgccgaac
acaacactaacatatgacatccaaaggataaacatccatgacagttttgaggcttccaga
aaagcatgtgatcaactctctctgggagtggcagctatttttggcccctctcacagttct
tcagccaatgcagtccagtccatctgcaacgcactgggggtgccacacatccagaccaaa
tggaagcaccaagtgtcagacaaccgtgactcattctatgtcagcctctacccagacttc
tcctccctcagcagggccatcctagacctggtgcactttttcaagtggaggatggtcaca
gtggtgtatgatgacagcacaggtcttatccggttacaggagctcattaaggcaccctct
cgttacaatatccggttaaaaatccgacagctgccagcagagacaaaagacaccaagcca
cttcttaaggagatgaagcgagggaaagagttccatgtgatctttgattgtggacatgag
atggctgctaccattcttaaacaggctcttgctatggggatgatgacagagtactaccac
tatatttttactacactggatctgtttgcgctggacgtcgagccttaccgctacagtggg
gtgaacatgtcagggttccgtattttaaacacagagaacagccaagtgtcctccatcatt
gaaaagtggtccatggagcgccttcaagcacctcccaaacctgattctggcttactagat
ggctttatgacgacggatgcagcactgatgtacgacgcagtgcatgtggtggccgtagcg
gtgcagcagtctccacagatcacagtcagctctctccagtgtaaccggcacaaaccctgg
cgctttggtaaccgcttcatgacgctcatcaaagaggcccactgggatggtttgaccgga
cggataaatttcaacaaaaccaatggcttaaggacagatttcgatctggatgtgatcagc
ctgaaggaggaaggactggagaagattggaacatgggaccctgtaagtggcctgaacatg
actgaaaatcagaagggaaagatgtcgaacatcacagactcactcaccaacaggacacta
tatgtgtctacaatactggaggagccctatgtgatgttcaagaagtcagacaagcctctg
catggcaatgatcgtttcgagggatactgcatcgacctgctgcgggagcttgcccacatc
ctgggcttcatctatgaggtgcggctggtcgaggacggcaagtacggagcgcaggaggag
agcacgggccagtggaatggcctggtgcgcgagctcatggaccataaagctgatcttgca
gtggctcccctagccatcacctacgtgcgggagaaagtcatcgatttctccaagccattc
atgaccctggggataagtattctgtaccgcaaacccaacggcaccaacccaggggtgttc
tccttcctcaaccctctttcccccgacatctggatgtatattctgctggcttacttgggt
gtcagttgtgtgctgtttgtcatagccaggtttagcccctacgaatggtataacccccac
ccatgcaaccccgactcggacgtggtggaaaacaatttcaccctgctaaatagtttctgg
ttcggagttggagctctcatgcaacaaggatctgagctcatgcccaaagccctttccacc
aggatagtaggaggtatctggtggtttttcaccctcatcatcatctcctcctacacggct
aacttggccgctttcctcacagtggagaggatggagtctcccattgattcagctgatgac
ctggccaaacagaccaaaattgagtatggtgtggtggaggatggctccacaatgaccttc
tttaaaaaaacaaagatctccacatacgacaagatgtgggagttcatgagcagtcgcagg
cattcagtcatggtgaagagtgtggaggagggcattcaacgggtgcttacctccgattat
gccttcctcatggagtccaccacaatcgagtacgtcacccagcgcaactgcaatctcacg
cagataggcggcctcattgactccaaatcctatggtgttggtactcctatgggctctcca
taccgagataagatcaccatagcaatcctgcagctccaagaagaagggaagctgcacatg
atgaaggagaaatggtggagagggaatggctgcccggaggaagagagtaaagaggccagt
gccctgggtgtgcagaacattggaggaatcttcattgttctggctgctggacttgttctc
tctgtctttgtggcagtcggggagttcctctataagtctaaacaaaacgcacaacttgaa
aagaggtccttctgcagtgctatgatggaggagctgcgagtgtccctcaagtgccagcgc
cggctcaaacacaagcctcagccgcctgtcatggtcaaaacggaggaagtcatcaacatg
cacaccttcaatgaccggagattaccaggcaaagagaccatggcataa
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