Ictalurus punctatus (channel catfish): 108271782
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Entry
108271782 CDS
T04658
Symbol
ptprfa
Name
(RefSeq) protein tyrosine phosphatase receptor type Fa isoform X2
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04514
Cell adhesion molecules
ipu04520
Adherens junction
ipu04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108271782 (ptprfa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108271782 (ptprfa)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
108271782 (ptprfa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108271782 (ptprfa)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108271782 (ptprfa)
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
108271782 (ptprfa)
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
108271782 (ptprfa)
Cell adhesion molecules [BR:
ipu04515
]
Immunoglobulin superfamily
Type II RPTP family
108271782 (ptprfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
PTP-SAK
Tc-R-P
V-set
DSPc
Y_phosphatase3
PTPlike_phytase
PTP-NADK
C2-set_2
Insulin_TMD
bPH_4
ICAM_N
Motif
Other DBs
NCBI-GeneID:
108271782
NCBI-ProteinID:
XP_017335020
Ensembl:
ENSIPUG00000015407
UniProt:
A0A2D0RYI8
LinkDB
All DBs
Position
11:complement(13687412..13952000)
Genome browser
AA seq
1910 aa
AA seq
DB search
MVPHHTRSSRFHSAASLLLLLGLAAHIRGDSMPSFIKSPEDQTGISGGVASFVCQAVGEP
KPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSMGEINTSA
KLTVLEEDQIPHGFPTIDMGPQLKVVERTRTATILCAASGNPDPEIFWFKDFLPVDINGS
NGRIKQLRSGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVPPRFSIPPTN
HEVMPGGSINLTCVAVGAPMPFVKWMRGETELTKEEEMPIGRNVLELNNIRQSANYTCVA
MSSLGMIETTAQIIVKALPRSPISLMVTETTATSVTLTWDSGNPEPVSYYVIQYRAKHSD
SGGFQEVDGVASTRYSIGGLSPFSPYEFRVMAVNNVGRGLPSTSVETRTGEQAPSSPPLR
VRARMLSSSTALVQWEPPEEPNGLIRGYRVYYTQDVHSYAPLSAWYKHNTADAAQLATIS
NLVPGTTYSLRVLAFTAVGDGPPSHTLQIKTLQGVPAQPSEFEAEAELDTRIMLRWLWPV
QDQIIKYELTYWEADSGHKNHVIFDPAGSYAVEGLKPDTLYKFTLAARSGMGLGLYTQPI
EARTAQSTPSAPPQDVHLLSLSSTSIKVSWVAPPVASRHGNIVRYSLAYQAPSGEDQERH
EVMDIAADATSYVLEGLEKWTLYHVWVKAHTDVGPGPESSSTWIRTQEDVPGAPPRRVEV
DAVNSTALHVSWKAPLAQKQHGEVRGYQVVYSRVEDGEPQGQPTILDIALPDAQEAFITG
LQAETSYSVTVAAYTTKGDGARSKAKVVTTTGAVPGKPTMIISTTVGNTALIQWQPPKET
FGELLGFRLQYKRQDDNDNDDKDDNDEGSFMTRHFMRTDDHFTVTGLLKGSTYSFRLSAK
NRAGHGEEHVKEVTTPEDTPSGYPQNLSVVGLSSTSTTLAWAPPTLVQRNGKIVRYDIVY
RDINSIKNQTNSTTETRMSISGLKPDTTYDIRVRAFTRKGPGPFSPSIQSRTMATSVPEF
AKNFGVKAATKTSVLLTWEVPETYKPQVPFKILYNQQSVEVQGDLRRKLITRLQPDTEYS
FVLMNRGSSAGGLQQQVSIRTAPDLLDTKPSRSAHESAVGGRVTLTLPAVTASTSAHVRW
YYIVVVPMSQATLRHWESPEDIDLDELLEAGGDSTVMKRKRRQSDDSLKPYIAARMHTLP
ESFTLGDERHYSGFYNRALLTQTHYRTFIMAALRDHDSKTFATSPFSDPIIVQVHMSRHA
EDPEMLWVMGPVLAVVLIIIIVITILLFKRKRASPSVKDEHTAGVKDHLLAHSSDPVEMR
RLNYQTQGMREHPPISVCDLAEHIERLKANDNLRFSQEYESIDPGQQFTWEHSNLEVNKP
KNRYANVIAYDHSRVVLSPIDAIPGSDYINANYIDGYRKQNAYIATQGPLPETVSDFWRM
LWEQRSSTIIMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTLLDTVELATYSVRTFTMYK
SGSSEKREVRQFQFMVWPDHGVPEYPTPILAFMRRVKTCNPPDAGPMVVHCSAGVGRTGC
FIVIDAMLERMKHEQAVDVYGHVTLMRSQRNYMVQTEDQYVFIHDALLEAAVSAHTEVPA
RSLYSHLQKLTNTPPGETVTAMELEFKKLANSKAHTSRFISANLPCNKFKNRLVNIMPYE
SSRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVM
LTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQ
FQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLE
RMRYEGVVDLFQTIKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atggtgccacatcacacacggtcgtctcgtttccacagcgcggccagcctgctgctgctg
ctcggactcgctgcacatatacggggagacagcatgcccagcttcattaagtctccagag
gatcagactggtatttctggaggtgttgcatctttcgtgtgccaggcagttggcgagccc
aaaccacgcatcacatggatgaagaagggcaagaaagtcagctcacagcgctttgaggtg
attgaatttgatgatggctcggggtcagtgttaaggatccagcccctgcggacacaccga
gatgaggcaatctacgagtgcacagccacaaacagcatgggggaaattaacaccagtgcc
aagctcactgtcctggaagaggaccagatccctcatggtttccccaccatagacatgggt
cctcagctgaaggtggtggagaggacccgcacagccaccattctgtgtgcagcaagtggg
aaccccgaccccgaaatcttctggttcaaagactttctccctgtcgacatcaatggcagc
aatggacgaatcaaacagctgcgctcaggtgcactgcagatagagaatagcgaggaatca
gatcagggaaaatacgagtgtgtggcgacgaacagcgccgggacaagatactccgctcca
gctaatctctatgtcagagtcaggcgagttcctccacgcttctctattccccccaccaat
catgaggtgatgcccggtggcagcatcaacctcacgtgcgtcgctgtcggtgccccaatg
ccttttgtcaagtggatgaggggtgaaacggagctgaccaaagaagaagagatgcctatt
ggccgcaacgtgttggagctcaacaacatccgccagtcagccaactacacctgtgtggct
atgtcctcgttgggcatgatcgagacaactgcgcagatcatcgtcaaagccctccctcgc
tcgcccatctctctaatggtgactgaaaccacagcaaccagcgtgactctgacgtgggat
tctggaaacccagagccggtctcatactatgtcatccagtaccgtgccaaacactctgac
agtggcggtttccaggaagtggacggtgtggcatcgacacgctacagcatcggtggtttg
agtccattctcaccatatgagtttcgtgtcatggctgttaacaacgtggggcgtggtctg
cccagcacatccgtggaaacacgaactggcgagcaggcaccatcgtctcctccgctgagg
gtacgggccaggatgctgagctcaagcacagcgctggtgcagtgggagccacctgaggag
ccaaatggcctgatcaggggctacagagtatattacacacaagacgtacactcgtatgcg
ccactcagtgcctggtacaagcacaacacggctgacgcagcacagctggccaccatctca
aacctggtacctggcactacctacagcctgcgtgtgctggcattcacagctgtaggagac
ggaccaccatcccacacactgcagattaaaacactgcagggagttccagcccagccaagt
gaattcgaggcagaggccgagctcgacactcggatcatgctgcgttggctttggcctgtt
caggaccaaatcattaaatatgagcttacctactgggaagctgactctggacacaagaac
catgtgatctttgacccagctggttcatacgctgtggaaggcctgaagcctgacactctg
tataaattcacactggctgcgcgctctggaatgggtctaggcttgtacacacagccgatt
gaggctcgcacggcccagtccacaccatccgcccctcctcaggacgtgcacctgctcagc
ctctcttctaccagcatcaaggtgagttgggtggcgcctcctgttgccagtcgccatggt
aacattgtgcgctactccctggcctatcaggcgccctcaggggaggatcaagagcgccac
gaggtgatggacatcgctgccgatgccaccagctatgtacttgagggactggagaaatgg
acactgtaccatgtgtgggttaaagcccataccgacgtcgggccgggccctgaaagcagc
agcacctggatccggacccaagaggatgtgcctggagctcctccacgcagggtggaggtg
gacgcagtgaactctacagcactccatgtgtcctggaaagctccgctggcgcagaagcag
catggagaagtccgcggttatcaggtggtatactcacgtgtggaggacggagaacctcaa
ggacagcccactattctggacatagcactgcccgatgctcaggaggccttcatcacgggt
ttgcaggcagagacatcatactcagttaccgtggcagcgtacacaactaaaggtgatggg
gctcggagtaaagccaaggtggtgaccactacaggggcagtgccaggtaagcccactatg
atcatcagcactacagtgggtaacacagctctgatccagtggcagcctccaaaagagaca
ttcggtgagctgttgggcttcagactacagtataaacgccaggatgacaatgataatgat
gacaaagatgacaatgacgaaggctcgttcatgacacggcacttcatgcgtaccgatgac
cacttcaccgtcaccgggctgctcaagggttccacttatagcttcagactgagtgccaag
aaccgagccggccacggagaggagcacgttaaagaggtcacgacccctgaggacacacct
agtggttacccgcaaaacctaagtgttgtgggattgagctccacctcaacaactctggca
tgggcaccaccaacactggtgcagagaaacggcaaaatcgtgcgctatgatattgtgtac
cgtgacatcaacagtataaagaatcaaaccaacagtacaacagagacacggatgagcatc
agcggcctgaaacccgacactacctatgacatcagagtgagagccttcaccaggaaagga
ccgggacctttcagccccagcattcagagcaggaccatggccacatctgtgcctgaattt
gccaaaaactttggggtgaaagcagcaacaaagacctcagtactgctcacatgggaggtg
cccgaaacctacaagcctcaagtgccttttaagatcctgtataaccagcagagcgtggag
gtgcagggcgatctgcggaggaaactgatcacccgtcttcagcccgacactgagtactca
ttcgtgctgatgaacagaggcagcagcgccggaggactgcagcagcaagtgtccatccgc
acagccccggacttgctcgacacaaagcccagccgctcggcccacgagtctgctgtgggt
ggaagagtcacactaaccttgcccgcagtgaccgccagcacctctgcacatgtcaggtgg
tactacatagtggtggtgcccatgagtcaagctacattgcgccactgggaaagtccagaa
gacatcgacctggatgagttgttagaggctggtggagattcaactgtgatgaagaggaag
aggaggcagagtgacgactctctgaagccatacatcgctgcgaggatgcacacactgccg
gagagcttcacactcggagacgagcggcactacagcggcttctacaacagagcactgctc
actcaaactcattaccgtaccttcatcatggctgctctccgggatcacgactctaaaaca
ttcgctacaagcccgttctctgaccccatcatagtacaggtgcacatgtcgcgacatgca
gaagatcccgagatgctttgggtgatggggccggtgctggctgtcgtcctcatcatcatt
atcgtcatcaccatcctgcttttcaagaggaagcgagcatctccctcagtgaaggatgaa
cacacagctggagtaaaggaccatctgctggcccactcgtctgatcccgtagagatgcgg
agactaaactaccaaacccaggggatgagagagcacccgcccatctccgtctgtgacctg
gccgaacacatcgagcggctcaaagccaatgacaacctccgcttctctcaggaatacgag
tcaattgatcctgggcagcagttcacctgggaacactcaaacctcgaagtgaacaagcca
aaaaaccgctatgctaatgtcatcgcctacgatcactccagagttgtcctgtcacccatc
gatgctataccagggagtgactacattaacgcaaattacatagatggatacaggaagcag
aatgcctacatcgctacacagggccccctgccagagactgtcagtgatttctggaggatg
ctgtgggagcagaggagcagcactatcatcatgatgacccgactggaggaaaagtcgaga
gtgaagtgtgaccagtactggccgagtcgggggacagagacgtacggcatgattcaggtg
acgctgctggacacagtggagcttgccacgtacagcgtcagaacctttacaatgtacaag
agtggctccagtgaaaagagggaggtgaggcagttccagttcatggtgtggccagatcat
ggcgtgcctgagtatcctactcctatcctggccttcatgcgccgagtcaaaacttgtaac
ccaccagatgctggaccaatggtggtgcactgcagtgcgggcgtgggccggacgggttgc
ttcatcgtgattgacgccatgctggagcgcatgaagcacgagcaagcagtggacgtgtat
ggtcatgtgaccctgatgcgctctcagaggaactacatggtccaaacagaggatcagtac
gttttcatccacgatgcgttgctggaggcagccgtctctgcacacaccgaggtccctgca
cgcagcctttactcacacctccagaaactcacaaacacacctccaggggagactgtcact
gccatggagctggagttcaagaaactggccaactccaaagcacacacttcccggttcatc
agcgccaacctgccgtgcaacaagttcaaaaataggctcgtcaacatcatgccatacgag
tccagccgagtgtgtctacagcccatcagaggagtggagggatccgactacatcaatgcc
agcttcatcgacggatataggcagcagaaggcgtacatagcgacacagggtcctctggcc
gagaccacagaggacttctggagaatgctttgggagcacaactccaccatcgtagtcatg
ctgaccaaactccgagagatgggaagggagaagtgccatcagtactggccagctgagcgt
tctgcacgttatcagtactttgtggtggaccccatggctgaatacaacatgccacagtac
atcctgcgagagttcaaagtcactgacgccagggatggccagtccaggaccatccggcag
ttccagttcactgattggccagagcagggtgtgccaaagacgggggaggggtttatcgac
tttattggccaggtgcacaaaaccaaggagcagtttggccaggacggaccaattactgtt
cactgcagtgccggcgtgggtcgtacaggagtgttcatcactctgagtatcgttctggag
aggatgagatatgagggagtggtggatctgttccaaaccatcaaaacactgcgcactcag
aggccagccatggtacagaccgaggaccagtatcagctgtgctaccgagcagctcttgag
tacctgggcagctttgatcactatgcaacataa
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integrated database retrieval system
