Ictalurus punctatus (channel catfish): 108271871
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Entry
108271871 CDS
T04658
Symbol
pkp1b
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108271871 (pkp1b)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
108271871 (pkp1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
108271871
NCBI-ProteinID:
XP_017335250
Ensembl:
ENSIPUG00000024791
UniProt:
A0A2D0RZ65
LinkDB
All DBs
Position
11:5816833..5839053
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AA seq
717 aa
AA seq
DB search
MTLEPLRSALSYGDIGETSLALPSDGASHSGQRRVMEQVTTMRKSKSKYTNRGSAGTLSP
TSPKSDSVFYEYKFPSSNLNGSDFAYEGTSANGHTRTRKQKQSIMQRSVSTRSGNYHRIQ
NNNMLPSSLPALSQPSPYMDLYTTQMGSKNNTTHWSQRYKQSKILDKSHSHPPLTSPVQM
IAGNSFHSTGNQFSGSNTLNRRPPSAHSNSEPKLSVASRKSEMNGMNGEANMSDITLSEA
IYWISQSDERYKLHGASVIQHSTYTDDNAKEEVRKLKGIAPLVSLLSSSNPQIQLTSASA
LRNLVFKNSANKEEVRRTGGLTAALQLLRDTNSAETQKHVTGLLWNLSSEESIQPDLLRQ
ALPVLTETVLQPNADTSALASDVEPRIESFCNATACLRNLSSGKLANRQALRNCEGLIDS
LVTHMQSCVDNGNQDDKSVENCVCALHNLTYQLESEVPAVFSKIQTLATASESRNNVADT
GPIGCFSNQSRKIQQESNSEYPLMDDFNPKGKSQLIHSKTLQLYLNLLGSTQNTNTQEAC
CGALHNLTAKKGIVSDVLSHTIVQRLNGLQNLSPQLQSPNLALKNSIITLIGNLSRPPQL
HRTLARQALPGLVKSLTTDLTPESDSAMAVACHTANNLMRAEPEMGKKLLSSAMMNSLNN
MSQNIAMPKTSKAAGALLHSLWSDKNIQSFLKKQGMNKTFFVNETTSAALRSLQIIE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgacactggaacccttgaggtcggctttatcttatggggacatcggagagacgtcgctg
gcgcttccgtcagacggagcttcccactcgggccagaggcgcgtcatggagcaggttacc
accatgaggaagagcaagagcaagtacaccaacagaggatcagcaggaacactgtccccc
accagccccaagagtgacagtgtgttttatgaatacaagttcccctcctctaatctaaat
ggatcggactttgcgtatgaaggcacctcggcaaatggacacacaagaacgaggaaacag
aagcagagcataatgcaaaggagcgtcagcaccaggtcaggtaactatcacaggatccaa
aataacaacatgttaccaagcagccttcctgctctaagccaacccagtccctacatggac
ctctacaccactcaaatgggcagtaagaataacaccacccattggagccagaggtacaag
cagtcaaaaatcctggacaagagtcacagccatcctccactcaccagtcctgttcaaatg
atagcaggcaacagctttcacagcaccggcaatcagttctctggcagcaataccctcaac
aggcgacctccttctgcccactcaaactctgagcccaagctctcagtggccagcaggaag
agtgagatgaacggaatgaatggagaggcaaacatgtctgatatcacattatcagaggcg
atatactggatcagccagagtgacgaaaggtataagctgcatggagcttccgttattcag
cacagcacatacacggatgacaatgccaaagaagaggtacggaagctaaaaggcattgct
ccattggtgtccttgcttagcagctcaaaccctcagatccagctgacgtcggcctccgcc
ctgcgtaaccttgtcttcaagaattcagccaacaaggaggaggtgcggcgcacaggaggg
ttgaccgcggctttgcagctactccgagacactaactcggctgaaactcagaaacatgtg
accggacttctgtggaacctgtcctcagaggaaagcattcaacccgatctgctacgtcag
gctctacctgtcctcacagagacggtgctgcagccgaacgcagacacctcagccttggcg
tctgatgttgaaccacgtattgagagcttctgcaacgccacagcatgtctacgaaatctg
agttctggcaaactggcaaaccgtcaagccttgcgcaactgtgagggcctgattgactca
ctagtcacacacatgcagtcttgtgtggacaatggcaatcaggatgataagtctgtggag
aactgtgtgtgtgctctgcacaatctcacctatcagctggaaagcgaggtgcctgctgtg
tttagcaagatacaaacgctggctacggcttctgaaagccgcaataacgtggctgacacc
ggccctatcggctgctttagcaaccagagccgcaagatccagcaagagagcaactccgaa
tacccattgatggatgatttcaatcccaaaggcaagagccagcttattcactcaaagaca
ctgcagttgtatctgaatctgcttggctccactcagaacacaaacacccaggaggcatgc
tgtggagcactgcacaacctcaccgccaagaagggcatcgtgtcagatgtgttgagtcac
accatcgttcagaggctgaatggtctgcagaacctctctccacagctacagtcaccgaat
cttgccctgaagaacagcatcattacactgattgggaacctgtctcgaccgccacagctg
cacagaactctggcgcgtcaggctcttcctggtctcgtcaagagcttgacaactgacctt
actccagagtctgatagcgccatggcggtggcctgccacacagcaaacaacctgatgagg
gcagaacctgagatggggaagaaattgctaagcagtgccatgatgaattcactcaataac
atgagtcaaaacatagccatgccgaagaccagtaaggcagcaggagctctccttcatagc
ctctggtctgacaagaatattcagagtttcctcaagaagcaagggatgaataagacattc
tttgtgaatgagacaacttcagctgccctcaggtctcttcagatcattgaataa
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