KEGG   Ictalurus punctatus (channel catfish): 108272010
Entry
108272010         CDS       T04658                                 
Symbol
gnb1b
Name
(RefSeq) guanine nucleotide binding protein (G protein), beta polypeptide 1b
  KO
K04536  guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04081  Hormone signaling
ipu04082  Neuroactive ligand signaling
ipu04371  Apelin signaling pathway
ipu04744  Phototransduction
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    108272010 (gnb1b)
  09133 Signaling molecules and interaction
   04082 Neuroactive ligand signaling
    108272010 (gnb1b)
   04081 Hormone signaling
    108272010 (gnb1b)
 09150 Organismal Systems
  09157 Sensory system
   04744 Phototransduction
    108272010 (gnb1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ipu04147]
    108272010 (gnb1b)
   04031 GTP-binding proteins [BR:ipu04031]
    108272010 (gnb1b)
Exosome [BR:ipu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108272010 (gnb1b)
  Exosomal proteins of colorectal cancer cells
   108272010 (gnb1b)
  Exosomal proteins of melanoma cells
   108272010 (gnb1b)
GTP-binding proteins [BR:ipu04031]
 Heterotrimeric G-proteins
  Beta Subunits
   Beta [OT]
    108272010 (gnb1b)
SSDB
Motif
Pfam: WD40_Gbeta Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_EIPR1 WD40_like Beta-prop_HPS5 Beta-prop_ACSF4 Beta-prop_VPS8 Myc-LZ DUF4407 CaM_bind
Other DBs
NCBI-GeneID: 108272010
NCBI-ProteinID: XP_017335556
Ensembl: ENSIPUG00000000618
UniProt: A0A2D0RZE3
LinkDB
Position
11:complement(4996428..5024048)
AA seq 340 aa
MSELDQLRQEAEQLKNQIRDARKACADATLSQITANIDPVGRIQMRTRRTLRGHLAKIYA
MHWGSDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
CSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
AGHTGDVMSLSLAPDSRIFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
FATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDSL
KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgagtgaactggatcagttacgccaggaggctgagcagctgaaaaaccagatcagagat
gcgaggaaagcctgcgctgatgccacactgtcacagataacggccaacatcgaccctgtg
gggagaatccagatgcgcacaaggcgaacactgaggggacatctggctaagatctatgct
atgcactggggctctgactccaggctgctggtcagtgcctcccaggatggtaaactcatt
atttgggacagctatactacaaacaaggtccatgcgatcccactgcgctcatcctgggtg
atgacatgtgcctacgctccctcaggaaactacgtggcctgcggaggcctggataacatt
tgctccatctacagcctgaagactcgcgaaggcaatgtgcgcgtcagccgtgagctggct
ggacacacaggatacttgtcctgctgccgcttccttgatgacaaccagattgtcacaagt
tctggtgacaccacctgtgctctctgggatatagagaccggtcagcagacaaccacgttc
gcaggtcacaccggagatgtgatgagcctgtccctggctccagattcgagaatctttgtg
tctggagcttgcgatgcctcggctaagctgtgggacgtgcgcgagggcatgtgcagacag
acctttaccggccacgagtccgacattaacgccatatgtttcttccctaatggcaacgcg
tttgccaccggctcagatgatgccacttgccggctatttgacctgcgtgcagatcaggag
ctgatggtttactcacacgacaacatcatttgtggcatcacctcagtggctttctccaag
agcggccgcctgctgctcgccggctacgacgacttcaactgcaacgtttgggacagtctg
aaggccgaccgtgcaggtgtgttggctggccatgacaaccgtgtaagctgtctgggtgtg
actgatgatggcatggctgtggctacagggtcctgggacagcttcctcaagatctggaac
tga

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