Ictalurus punctatus (channel catfish): 108272216
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Entry
108272216 CDS
T04658
Symbol
vdrb
Name
(RefSeq) vitamin D3 receptor B
KO
K08539
vitamin D3 receptor
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108272216 (vdrb)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108272216 (vdrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ipu03310
]
108272216 (vdrb)
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108272216 (vdrb)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108272216 (vdrb)
Nuclear receptors [BR:
ipu03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
108272216 (vdrb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
zinc_ribbon_6
Motif
Other DBs
NCBI-GeneID:
108272216
NCBI-ProteinID:
XP_053539586
Ensembl:
ENSIPUG00000020135
UniProt:
A0A9F7RCE1
LinkDB
All DBs
Position
11:27833085..27878088
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AA seq
425 aa
AA seq
DB search
MQKNSVMESTVSTSTQVPDEYDRNVPRICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRK
ASFTCPFSGSCSITKDNRRHCQACRLKRCLDIGMMKEFILTDEEVRRKKDLIQKRKDEEA
QKEAQKPRLSEEQSAIISMLVEAHHKTYDDSYSDFSRFRPPVRQGPVTRSASRAASLHSL
SDTSSDSFRHSPDSADGKLNLSSMLMMYQGQGSSPDSKEGDSSRLSMLPHLADLVSYSIQ
KVIGFAKMIPGFRELTAEDQIALLKSSAIEVIMLRSNQSFSLEDMSWCCGGPEFKYCIND
VTKAGHTLELLEPLVKFQVGLKNLNLHEEEHVLLMAICLLSPDRPGVQDHERVETLQERV
SEVLQAYIRVHHRGRLHYAKMIQKLAELRSLSEEHSKQYRTLSFQPEHSMQLTPLVLEVF
GGQVT
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaactcggtgatggagtccacagtaagcacgtccacgcaggtgcccgatgaa
tacgaccggaacgttccgcggatctgcggtgtgtgtggagacaaagctaccggcttccac
tttaatgccatgacctgtgagggctgcaagggcttcttcagacgcagtatgaagcgcaag
gccagttttacgtgccctttcagcgggagctgcagcatcactaaagacaaccggcgtcac
tgccaggcctgcagactcaaacgctgtctggatattggcatgatgaaggagtttatcctg
accgacgaggaggtgcggaggaagaaagatctgatccagaagaggaaggacgaggaggcg
cagaaagaagctcagaagccccgtctctctgaggagcagagcgccatcatctccatgctg
gtggaggcgcatcacaaaacctacgacgactcgtactccgacttctcccgcttccgacct
ccagtgagacagggtcctgttacacgcagtgccagtcgtgctgcttctctacactcactg
tccgacacttcctccgactccttccgccactctcctgattcggcggatgggaagctcaac
ctgagcagtatgttgatgatgtatcaggggcagggttctagtcctgactctaaggaggga
gatagttcccgcttgtccatgctgcctcacctggccgatctggtcagctacagcatccag
aaggtcatcggatttgccaagatgatccccggattcagagagttaacagcggaggatcag
atcgctctgctgaagtctagtgccattgaggtgatcatgctgaggtccaatcagtccttc
agtctggaggatatgagctggtgctgcggagggcccgagttcaagtactgcatcaatgat
gtcactaaagctggccacactctggagctgctggagccgctggtgaagttccaggtaggg
ttgaaaaatctgaatctgcacgaggaggaacacgtgctgctgatggccatctgcctgctg
tcccctgaccgccccggcgtgcaggatcacgagcgtgtggagactctacaggagcgtgtc
tccgaggtcctccaggcgtacatccgagtccaccaccgcggacgtctgcattacgccaag
atgatccagaagctggcggagctgcgcagcctgagcgaggaacactcgaagcagtaccgc
acgttgtccttccagcccgagcacagcatgcagctcacgccactcgtcctcgaggtgttc
ggcggacaggtcacctag
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