Ictalurus punctatus (channel catfish): 108272368
Help
Entry
108272368 CDS
T04658
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain isoform X1
KO
K06751
MHC class I antigen
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
ipu04145
Phagosome
ipu04218
Cellular senescence
ipu04514
Cell adhesion molecules
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108272368
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108272368
04145 Phagosome
108272368
09143 Cell growth and death
04218 Cellular senescence
108272368
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108272368
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108272368
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
108272368
Exosome [BR:
ipu04147
]
Exosomal proteins
Proteins found in most exosomes
108272368
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
Antigens
108272368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
C2-set_3
MHC_I_3
ig
Motif
Other DBs
NCBI-GeneID:
108272368
NCBI-ProteinID:
XP_017336228
Ensembl:
ENSIPUG00000017889
UniProt:
A0A2D0S0E9
LinkDB
All DBs
Position
12:28168310..28173708
Genome browser
AA seq
333 aa
AA seq
DB search
MKERKTLFILLFFLHPVQLFGDDVHSISGFFISSQGLSLPNYMERITVNDVTIFYHDSGK
NIIAPCPKWLNTTTGQQHWENIRVISQHNKQMIATAIESAIQQFNLTGSHADINIYQGYS
RCDLYPNGTMKASLAHAFNGKDFLSLDFDSKTYITSVPQALKYKRLREQNSVLFGITVSF
YQKTCFDRLKMFLKHAPGVKMQKEPKVRLFERQRAGSTLLTCHVTGFYPRAVQVKWIGAD
LQLVDDEMNDVLPNGDGTFQTRSSVIRPEENTGDQRYSCVVHHSSLEGNITVTWGKEEKP
FRLYVWITLGCVFIVTVVGLVIRCILKSKDAGI
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaggaaaacccttttcattttactttttttcttacatcctgttcagctgttt
ggtgatgatgtccattccattagtggctttttcatcagttctcaaggcctaagcctgccc
aattatatggaaagaatcactgtgaatgatgttaccatcttttaccatgacagtgggaaa
aacatcatagcgccatgtcccaaatggctcaacaccaccaccggccagcagcactgggaa
aacatcagagttatatcacaacacaacaaacagatgatagctacagctatcgaatcagcc
atacaacagttcaatctaacaggttcacatgcggacattaacatataccaaggctacagt
cgctgtgacctctatccaaatggcaccatgaaggcatcgttagcccatgctttcaacggg
aaggacttcttaagtttagattttgacagtaagacgtacatcacttctgttcctcaagct
ctgaaatataaaaggctgagggagcaaaattcagtgttgtttggaatcactgtgtctttc
taccaaaagacctgttttgatcgcttgaagatgttcttaaagcatgcccctggagtcaaa
atgcagaaggaaccgaaggtcaggcttttcgagaggcagagagctggttccacgctcctc
acatgtcatgtgactggattttacccgagagcagtgcaggtgaagtggattggggcagat
ttacagctggtggatgacgagatgaatgatgtgctgcctaatggtgatggcacgtttcag
accagaagcagtgtgatcagacctgaggagaacacaggagatcagcgctacagctgtgta
gtgcatcacagcagcctagagggaaatattacagtcacctggggtaaagaagagaaaccc
ttcagactttatgtttggattacactaggctgcgttttcatcgtcactgtagtcgggctt
gtaatccgatgcatcttaaaaagtaaagatgctgggatttga
DBGET
integrated database retrieval system
