Ictalurus punctatus (channel catfish): 108273424
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Entry
108273424 CDS
T04658
Symbol
lgi1b
Name
(RefSeq) leucine-rich glioma-inactivated protein 1b
KO
K25428
leucine-rich repeat LGI family member 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
108273424 (lgi1b)
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Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
Motif
Other DBs
NCBI-GeneID:
108273424
NCBI-ProteinID:
XP_017338118
Ensembl:
ENSIPUG00000011310
UniProt:
A0A2D0S5U8
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Position
13:7279228..7285522
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AA seq
595 aa
AA seq
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MCFFFLHVFIFGTRRLGAFLRPRRIRIVVGLLRSSSCAECVRVPGSEVNRVRMGHGGGTL
GFTVTLLCAAALCLSAESRRGNKQPRCPVGCTCTKDNALCENIRTVPNTFPPDVVSLSFV
KSGFSEIAPGSFLHTPSLQLLLFTANTFDSIDEDAFQGLPHLEYLFIENNKIESMSPLAF
RGLKSLLHLSLAYNNLETLPKDVFKGMDALTKVDLRGNMFICDCKLKWLVEWMHNTNATV
DPIHCSGPPLYQGRKINELMPQAFDCITAEFVSKKTLKFESISAETFTVGNDQYAVFAQP
FAGTCSFMEWDHVNMEFRPFDSIESTSTVVCKPMVIDDQLFIIVAKLFGGSHIYKRDTSA
HKFIKIQDIDILKIRKPNDVETFRLDGEWFFAIADSSKAGSTTVYKWNGNGFYSHQSLHP
WHRDTDLEYLEIGGKPHLILSSSSQRPVVYQWSRSQRFERRTDIPETEDVYAVKHFRARG
ELYICLTRFIGDSKVMRWDGAMFTEVQSVPSRGSMVFQPVTVGSWQYAILGSDYSLTQVY
QWDSKKGRFVHFQELNVQAPRAFSLVSIDNHELLLASSFKGRTQIYEHLIIDLSN
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtgctttttttttttgcatgtgtttatattcgggacgagacgcttgggtgcctttctg
agaccgaggcgcatccgtatagttgtgggtttgctccggagcagctcgtgcgctgagtgt
gtccgtgtcccaggctctgaagtgaaccgggtcagaatgggacacggcggcgggacactg
ggcttcactgtgacgctgctctgcgccgcagcgctctgtctctcggctgagagccgcagg
gggaataaacagccccgctgccccgtgggatgcacgtgcaccaaagataacgccttgtgc
gaaaacatcaggactgttccgaacaccttccctccggacgtcgtctcactatccttcgtg
aagtccggcttcagtgaaatcgccccaggaagcttcctccacacgccgtctcttcagctg
ctcttgtttacagccaacacttttgactctattgatgaagatgcgtttcagggcctgcca
catctggagtacttgtttattgaaaacaacaaaatcgagtccatgtcacctttggccttt
agaggtttgaaatctctccttcatctgagtcttgcctataataaccttgagacgttaccc
aaagatgttttcaaggggatggatgccttaacaaaagtggatcttcgagggaacatgttc
atctgtgattgtaaactgaaatggctagttgagtggatgcacaacaccaacgcgacagtg
gacccgatacactgtagcgggccgccgctttatcaagggaggaagatcaacgagctgatg
cctcaggcgtttgactgtataactgcagagtttgtttccaagaagaccctgaagttcgag
tctatctcagcggagaccttcactgttgggaacgatcagtatgcggtgtttgcacagcct
tttgcgggaacatgtagcttcatggaatgggaccacgtcaacatggagttcagacctttt
gacagtatagagagtacctccaccgtggtctgtaagccaatggtgattgatgaccagctt
ttcattattgtcgcaaaactgtttgggggctcacacatttacaagcgggacacatcagcc
cacaagttcatcaagatccaagacattgatatcctgaagatccgcaagcccaacgatgtc
gagacgttccgcttggacggcgagtggttcttcgcaattgctgacagctccaaagcaggc
tccactactgtgtacaagtggaacggcaacggcttctactcacaccagtctctacatccg
tggcaccgtgacacggatttggagtatctggagatcggtggcaaacctcatctgatcctg
tccagcagctcgcaacggcccgtcgtctatcagtggagccggagccagaggtttgagcgg
cgcacagacatccctgagacggaggacgtatatgccgtgaagcacttcagagccaggggt
gagctttatatctgcctgacacgcttcattggcgactcgaaggtgatgcggtgggatggt
gccatgttcaccgaggtgcaaagtgtgccatcacgtggctccatggtcttccagcctgtg
acagtcggaagctggcagtatgccatcctgggcagcgactactcactcacgcaggtctac
cagtgggactccaagaagggccgctttgtgcacttccaggagctgaacgtccaagcccca
agggctttctccctggtatccattgacaaccatgagctcctgctcgcctccagtttcaaa
gggaggacacagatctatgagcacctcatcatcgatctgagtaattga
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