KEGG   Ictalurus punctatus (channel catfish): 108273948
Entry
108273948         CDS       T04658                                 
Name
(RefSeq) NHP2-like protein 1
  KO
K12845  U4/U6 small nuclear ribonucleoprotein SNU13
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03008  Ribosome biogenesis in eukaryotes
ipu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108273948
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    108273948
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ipu03041]
    108273948
   03009 Ribosome biogenesis [BR:ipu03009]
    108273948
Spliceosome [BR:ipu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    108273948
Ribosome biogenesis [BR:ipu03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    108273948
SSDB
Motif
Pfam: Ribosomal_L7Ae RNase_P_pop3 PELOTA_1
Other DBs
NCBI-GeneID: 108273948
NCBI-ProteinID: XP_017339150
Ensembl: ENSIPUG00000002874
UniProt: Q2HYK1
LinkDB
Position
2:complement(29266011..29269227)
AA seq 128 aa
MTEPEVNPKAYPLADATLTKTILDLVQQASNYKQLRKGANEATKTLNRGISEFIVMAADA
EPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIATSVTIKEGSQLKPQIQSLQ
MAIERLLV
NT seq 387 nt   +upstreamnt  +downstreamnt
atgaccgagccggaagtcaacccaaaggcgtatcctctggcagacgccactttaactaaa
accatcctggatctggtgcaacaagcttccaactataaacaactgaggaaaggagctaat
gaagccaccaaaactctcaatcgtgggatctcggagttcatagtgatggctgctgacgca
gagccgttggagatcattcttcatttgccgctgctgtgtgaggataagaacgtcccatat
gtgttcgtgcgctccaagcaggccttgggccgagcatgtggagtgtcccggcctgtaatc
gccacctcagtcactataaaggagggttcacagctcaagcctcagatccagtctctgcag
atggccattgagagactgttggtctga

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