Ictalurus punctatus (channel catfish): 108273948
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Entry
108273948 CDS
T04658
Name
(RefSeq) NHP2-like protein 1
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03008
Ribosome biogenesis in eukaryotes
ipu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108273948
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108273948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108273948
03009 Ribosome biogenesis [BR:
ipu03009
]
108273948
Spliceosome [BR:
ipu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108273948
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
108273948
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
RNase_P_pop3
PELOTA_1
Motif
Other DBs
NCBI-GeneID:
108273948
NCBI-ProteinID:
XP_017339150
Ensembl:
ENSIPUG00000002874
UniProt:
Q2HYK1
LinkDB
All DBs
Position
2:complement(29266011..29269227)
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AA seq
128 aa
AA seq
DB search
MTEPEVNPKAYPLADATLTKTILDLVQQASNYKQLRKGANEATKTLNRGISEFIVMAADA
EPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIATSVTIKEGSQLKPQIQSLQ
MAIERLLV
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagccggaagtcaacccaaaggcgtatcctctggcagacgccactttaactaaa
accatcctggatctggtgcaacaagcttccaactataaacaactgaggaaaggagctaat
gaagccaccaaaactctcaatcgtgggatctcggagttcatagtgatggctgctgacgca
gagccgttggagatcattcttcatttgccgctgctgtgtgaggataagaacgtcccatat
gtgttcgtgcgctccaagcaggccttgggccgagcatgtggagtgtcccggcctgtaatc
gccacctcagtcactataaaggagggttcacagctcaagcctcagatccagtctctgcag
atggccattgagagactgttggtctga
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