Ictalurus punctatus (channel catfish): 108273964
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Entry
108273964 CDS
T04658
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04140
Autophagy - animal
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108273964
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108273964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108273964
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108273964
Membrane trafficking [BR:
ipu04131
]
SNARE
SNARE associated proteins
Others
108273964
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
108273964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_13
PH_6
Motif
Other DBs
NCBI-GeneID:
108273964
NCBI-ProteinID:
XP_017339168
Ensembl:
ENSIPUG00000015146
UniProt:
A0A2D0S8U7
LinkDB
All DBs
Position
13:4434260..4450658
Genome browser
AA seq
1014 aa
AA seq
DB search
MLATQLPDSVLEAKNVIQWIKEKIAQTLKTLQKRYVTTDAPVTSEDSEANQLCCALEAVF
IHGLRSKHIRADGTGARNRKGGSLPQPVFWNLLKTITHRNVILELEGLSFINSDVGRCRA
WVRLALNDGLLECYMISLLREGTKLGAHYQPGALLLDPEEREVLLSLLQGLASLAFQLSY
KSAMLNEWTTTPLALAGLCPLLPTDDLGPPSSRRESWDTASQSSGSGGSGRGQEGRTPSD
LSLDTAGSCHLSSSFGSERESWSCQTENKSALGETSSSSSQDIIKDLDVLSPAADRMIES
SPHSSSDEDSSNKQDVHQVLECSMDSSIPNAHSVVLEREPSGEELAEPAAALVNIRPIDV
ESRIIEDQKQDEDSPAVSFDTSTPMLTCQVLTSDSLAPDTLAPSISSDVELVKNSENASF
PHTSNALSRKTSAGSVCSHQKSRSWISEEDIYKPDTYASADSKEPDGVVEFAQLNGTVSP
VAEPESHQSPPSVVRRRQIGLSNPFRGLLKLGQLERRGPMGLWRACHCELSPFELRLYAD
DEERNICENRSLLRCEDVHLGSDGRFHLEFSGKKLQLRAPSKAEAEDWVERILEAVSNVR
HQPLDDWDDLSPSIMPVSIPTEPSNLPVIDWNRPCELEPDAIKETVVLLNREEQGWRLMV
LSLSLELFQGFSMQNGCKTRLFSYGIDAVRDVVPAVALGGPAFFKVLTAKETLTVQAESG
EEARAWRSIIRDALDAYLEEDNETGGEITSLSGGNIHRLVQHRLKGDAVLLPYLTIVPKE
KGLNAQNFKCAGCLRQIGVSLGRARLCEFSGQYYCDTCHQGDTTIIPSRVVHNWDLTARE
VSRQALKLLTDIEQEPLLNLDLLNPDLFDHSETMATVQHFRQRLRLLGDYLLTCRSGIRK
KVEARLKQRTYLLESSDLYSVLDFRQIADSQYESFLQSLIQFSCKHVHHCDLCTQRGFIC
QICNVDDIIFPFQFDTTSRCKACKTVFHSSCKAQSVTCPRCERLQRYKERDLLE
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcaacacagctccctgactctgtcctagaggccaaaaatgtcatacagtggatc
aaagagaagatagcacagacgctgaagacgctgcagaagcgctacgtgaccaccgatgca
ccggtgaccagcgaggactctgaggccaaccagctctgctgtgctctggaagcagtgttc
attcatggcctccggagtaaacacatccgcgcagatggaacaggagcgcgcaaccgcaaa
ggaggctcacttcctcagcccgtcttctggaacctgcttaagaccatcactcacagaaac
gtgattctggagctagagggcctgagcttcatcaactctgacgtaggccggtgcagggca
tgggtgcgtttggcactgaatgatggactattggagtgctacatgatatcacttctccgt
gagggcaccaagctgggggcccactaccagcctggtgcactgctccttgaccctgaggag
cgtgaggtgctactcagccttctgcaaggcctggcctcgcttgctttccagctctcctac
aaatctgcaatgctcaatgagtggaccaccacaccgctggcacttgccggtctatgtcca
ctgctgcctactgatgatttggggcctccctcttcacgcagagaatcctgggatacagca
tcacagtcatctggatccgggggctcggggagaggtcaggaaggcaggacaccctcagac
ctcagcctggacacagctggctcttgccatctctcttccagctttggctcagaaagagag
agctggagctgccaaacagagaacaagagtgcacttggagaaacgagtagctcctctagc
caagatataataaaagaccttgatgtgcttagccctgctgcagacagaatgattgagtcc
tctcctcacagcagtagtgatgaagactcctctaacaaacaggatgtacaccaagtgctt
gaatgttccatggattcatctatccccaacgcacactcagttgttttggagagagagcca
tcaggagaggaattagcagagcctgcagctgctcttgtaaatataagaccaatagacgtt
gagtctcgcatcatagaagatcagaagcaggatgaagactctcctgctgtttcctttgat
acttccactcctatgttaacctgtcaggttctgacttctgactcattggctcctgacact
cttgctccatcgatttctagtgatgttgagctggtaaaaaactcagagaatgcttctttc
cctcacacttctaatgctctgagcaggaaaacatctgcaggctctgtctgttctcatcaa
aaatccaggtcttggatctcagaggaggatatttataagccagatacttatgcaagtgca
gattctaaagagcctgatggtgttgtagaatttgcccagcttaatggaacggtatctcct
gttgctgaacctgaatcccaccaatctccacctagtgtggttcgtcgtagacagatcggc
ttgtcaaacccgtttcgaggtcttctaaagctgggccagctggaacggcgtggtcctatg
ggtctgtggcgtgcatgccactgtgagttgtcaccatttgagcttcgcctgtatgctgac
gatgaggagcgtaacatctgtgaaaaccgctcactgctgcgctgtgaggatgtgcacctg
ggctccgatggccgcttccatctcgaattctctggaaagaagctccagttgcgggcaccg
agcaaagccgaggctgaggactgggtggagcgcatattagaggctgtgagcaatgtgcgg
caccaaccgcttgatgactgggatgacctctcgccctcgatcatgcctgtgtctataccc
actgagccatctaatctgcctgtgatagactggaacaggccctgtgagctagaaccagat
gccataaaggagacggtggtgcttctgaaccgggaggagcaaggttggcgtttgatggtg
ctctctctctcgctggagctgtttcaaggtttttcaatgcagaatgggtgtaaaacacgc
cttttctcttatggcatcgatgctgtgcgggatgtggtgcctgccgtggcgctgggcggc
cctgccttctttaaggtgctgaccgcaaaggagacactaacggtgcaggccgagagtggc
gaggaggcacgggcctggaggagcattatccgagatgcgctggatgcatacctggaggag
gacaatgagacaggaggtgaaatcacatctctgagtggaggcaacatccacagacttgtt
cagcacaggctgaagggggatgcggtgcttctgccctatctgacaatcgtccctaaagaa
aaagggctaaatgcacagaacttcaaatgtgcaggctgtctgaggcagattggtgtttct
ttgggacgagccaggctgtgtgagttctcgggtcaatactactgtgatacctgtcaccaa
ggtgacaccaccatcatcccctctcgcgttgtgcacaactgggatctcaccgcacgtgag
gtctccaggcaggccttgaagctgctgactgacattgagcaggagcccttgctcaatctt
gacctcttaaaccctgacttgtttgatcacagtgaaaccatggcaacagtgcaacacttc
aggcagagactccgccttcttggagattacctcctcacctgtcggagtggaatccggaaa
aaagtggaggccaggttgaagcagagaacctacctattggagtcaagtgatctatatagc
gtgctggacttcaggcagatagcggacagccagtacgagtccttcctgcagtctctcatc
cagttctcctgcaagcacgtgcatcattgcgacctctgcactcagcgaggcttcatctgc
cagatctgcaacgtggacgacatcatttttccttttcagtttgacaccacctctaggtgt
aaggcatgcaaaacagttttccactcctcctgtaaagcccagagtgttacctgtcctcgc
tgtgagcgtctgcagagatataaagagcgagaccttcttgaataa
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