Ictalurus punctatus (channel catfish): 108274080 Help Entry 108274080         CDS       T04658                                  Name (RefSeq) methionine synthase isoform X1   KO K00548   5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu00270   Cysteine and methionine metabolism ipu00450   Selenocompound metabolism ipu00670   One carbon pool by folate ipu01100   Metabolic pathways ipu01230   Biosynthesis of amino acids ipu04980   Cobalamin transport and metabolism ipu04981   Folate transport and metabolism Brite KEGG Orthology (KO) [BR:ipu00001]  09100 Metabolism   09105 Amino acid metabolism    00270 Cysteine and methionine metabolism     108274080   09106 Metabolism of other amino acids    00450 Selenocompound metabolism     108274080   09108 Metabolism of cofactors and vitamins    00670 One carbon pool by folate     108274080  09150 Organismal Systems   09154 Digestive system    04981 Folate transport and metabolism     108274080    04980 Cobalamin transport and metabolism     108274080 Enzymes [BR:ipu01000]  2. Transferases   2.1  Transferring one-carbon groups    2.1.1  Methyltransferases     2.1.1.13  methionine synthase      108274080 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding CdhD Motif Other DBs NCBI-GeneID:  108274080 NCBI-ProteinID:  XP_017339421 Ensembl:  ENSIPUG00000005091 UniProt:  A0A2D0SAE2 LinkDB All DBs Position 13:23677914..23707153 Genome browser AA seq 1268 aa AA seqDB search MGPVVQCETETGAGAASLEAELREILQKRIMVLDGGMGTMIQQRNLVEDDFRGQEFKDHS RSLQGNNDLLSITKPEVIYTIHKEYLLAGADIVETNTFSSTRVAQADYGLEELAYRLNKV SAEIARKAADEVSAQTGLKRYVAGALGPTNRTLSVSPSVERPDFRNITFDELVEAYLEQV KGLLDGGCDILLVETIFDTANAKAALYAIDKLFEESYKPRPIFISGTIVDKSGRTLSGQT GEAFVISVSHMKPLCIGLNCALGATEMRPFIEAIGKCTGAFIICYPNAGLPNTFGGYDET PECTATHLKEFATDGLVNIVGGCCGTTPDHIRAIAERVKQCQPRVPPTDVFSSYMLLSGL EPFRIGPYTNFVNIGERCNVAGSRKFAKLIMAGNYEEALSIAKAQVEMGAQVLDINMDEG MLDGPAAMARFCKLIASEPDIAKVPLCIDSSNFAVIEAGLKCCQGKCIVNSISLKEGEEV FLQHAKQVRRYGAAVVVMAFDEQGQATEIDQKVEFCTRAYHLLTEKVDFNPNDIIFDPNI LTIGTGMEEHNVYAINFIKATRIIKETLPGARISGGLSNLSFSFRGMEAIREAMHGVFLY HAIKDGMDMGIVNAGSLPVYDDIDKDLLKLCEDLIWNRDPEATEKLLLYAQNNAKGGKKV IQTDEWRNGSVEERLEYALVKGIEKFVVEDTEEARLQTDRYSRPLHIIEGPLMNGMKTVG DLFGAGKMFLPQVIKSARVMKKAVAHLIPFMEKEREEMIALSGVPDDSDPYQGTIVLATV KGDVHDIGKNIVAVVLGCNNFRVIDLGVMTPCDQILKAAIDKKADIIGLSGLITPSLDEM IYVAKEMERLGMKTPLLIGGATTSKTHTAVKIAPRYTAPVIHVLDASRSVVVCSRLLDEG VYEDFFEELTEEYKDIRQDHYDSLKDRRYLSLAQARDKGQHIDWLSQPEPDQPRFLGTRV FDAYDLRRLVDYIDWKPFFDVWQLRGKYPNRGYPKIFKDKTVGEHARRVFDEAQRLLNRL IDSKGLQGRGIVGFWRAQSHGDDILVYTDDATPTLSNHTATFYGLRQQAEKDSACSDPYF CLADFVAPLESGVKDYVGLFAVGVFGAEKLSQEFVQQGDDYNSIMVKALADRLAEAFAEE LHARVRKEFWAYSKEEDLEASDLHKVRYSGIRPAPGYPSQPDHTEKRTMWTLAQIQEKTG ISLTESLAMSPAAAVSGLYFANPKSTYFAVGKITKEQAEDYARRKEIPVTEAEKWLAPNL AYDTDLAT NT seq 3807 nt NT seq  +upstreamnt  +downstreamnt atgggtccggtagtccagtgtgagacagaaacaggggctggagcagcttctctagaggct gagctcagagagatactgcagaagaggatcatggtcctggatggtggaatgggaaccatg attcagcagaggaacctagtggaagacgacttccggggtcaggagttcaaagatcactca cgaagcctgcaaggcaacaatgacctgctgagcatcaccaagcctgaggtgatctacacc atccacaaggagtatctgcttgctggagcagatatcgtcgagacgaacacattcagcagt acacgggttgctcaggcggactacgggctcgaggagctggcttatcggcttaacaaggtg tcggcagaaatagcccggaaggctgctgatgaagtttctgctcagacaggtcttaaacgg tacgtggctggagctttagggccgaccaacagaactctctccgtgtcaccgtcagtggaa agaccagacttcagaaacatcacctttgacgaactggttgaggcgtacctggagcaggtt aaagggctgctggatggaggctgtgatatcctgctggtggaaaccatctttgatacggct aatgcaaaggctgctctgtatgctattgataaactgtttgaggagtcgtataaaccaaga cccatatttatctccgggacgattgtggacaagagtggccgtactctatcggggcaaaca ggagaggcttttgtcatcagcgtgtcccatatgaagccactctgtattggtttgaactgt gctctgggagccactgaaatgaggccatttatcgaagcgatcggaaagtgcaccggggct ttcatcatatgttaccccaacgcaggtcttcccaacacatttggaggctatgatgaaacc ccagagtgcactgctacacatttaaaggagttcgcgacagacggtttggtgaacattgtc ggtggctgctgtggaacgacgccagaccacatacgggcgattgctgagagagtgaaacaa tgccagcccagagttcctccaacagacgtgttcagcagttacatgctgctgtctggtctg gagccatttcggatcgggccgtacaccaactttgtcaacatcggtgagcgctgcaacgtg gctggatcacgcaagttcgccaaactcatcatggctgggaattatgaggaggcgttgagt atagctaaagcacaagtggaaatgggcgctcaggtgttggatatcaacatggatgaaggg atgctggacggacccgctgccatggcgcgtttctgcaaactcatcgcttccgagcctgac atcgccaaggtgccgctgtgtatcgactcgtctaattttgcagtgatcgaggcaggactg aagtgctgccagggcaagtgcatcgtcaacagcatcagcctgaaggagggagaagaggtc ttcctgcaacacgccaaacaagtgcgtcgctacggtgccgccgtcgtcgttatggccttc gatgaacaagggcaggctactgaaattgatcagaaggtcgaattctgcacaagagcctat catctcctaactgaaaaggtggactttaaccccaacgacatcatctttgaccccaacatc ctgaccatcggcactgggatggaagagcacaacgtgtacgctatcaacttcatcaaagcc acacggattataaaggaaacattgcctggagcgcggatcagtggtggtctgtctaacttg tccttctcttttcgaggcatggaagccatcagggaggccatgcacggagtgttcctctac catgctataaaggatgggatggacatgggaattgtgaatgcaggttctctgcctgtgtat gacgacatcgataaagatctactcaagctgtgcgaggatctcatctggaaccgagaccca gaggccacagaaaagctccttctgtatgctcagaacaacgctaaaggagggaagaaggtc attcagacagacgagtggagaaacggaagtgtggaggagcgactggagtacgcacttgtg aagggtatagagaagtttgtagtggaggacaccgaggaggctcgtcttcagacagatcgt tattcccgaccactccacatcatcgaagggccgctcatgaatggcatgaagaccgtggga gatctgtttggagctggcaagatgttcctgccacaggtgattaaatcggcgcgtgtgatg aagaaagccgtagcccatctgattccctttatggagaaagagagggaggagatgattgct ttgtctggagtgcctgatgactctgatccttatcagggcacgatagttctggccacagta aagggagacgtccacgacatcggcaagaacatcgtggctgttgtgctgggatgcaacaac tttcgggtgattgatttaggagtgatgactccatgtgatcagatcctgaaggcagccatt gacaagaaagcagatattatcgggttgtcgggcctcatcacgccgtccctcgacgagatg atttacgttgcaaaggagatggaacgtctgggcatgaaaacccctctgctgatcggagga gccacaacttcaaagactcacacagcagtaaagattgcccctcgatacaccgctcctgtt attcacgttctcgatgcgtctcggagtgttgtcgtgtgttctcggctgttggatgaaggg gtgtatgaggatttcttcgaggagttaacggaggagtataaagatatcaggcaggatcac tacgactctcttaaggataggcgatacttgtctcttgcacaggcacgggataaaggccaa cacatcgactggctctcacagccagaaccagatcagccaaggttcctgggcacgcgtgtg tttgacgcatatgacctgaggaggctggtggactacatcgactggaagcccttctttgac gtgtggcaactgagggggaaatatcccaaccgagggtaccccaaaatctttaaagataaa accgtgggagaacatgccaggcgtgtgtttgacgaagctcagaggcttctgaacaggctg attgacagtaagggtctgcaaggaagaggcatcgtgggcttctggcgtgcacaaagccac ggcgacgacattctcgtatacaccgatgatgccactccaaccttatcgaaccacactgct accttctacgggcttagacagcaggcagagaaagactccgcatgttcggacccgtacttc tgtctggcggattttgttgctccgttggaaagcggagtgaaggactatgtcgggctgttt gcagtcggtgtgtttggtgccgaaaagctcagccaagaatttgtgcagcagggcgatgat tacaacagcatcatggtgaaagccctcgccgacagactcgctgaggcgtttgctgaggag ctccatgcccgcgtgaggaaggagttctgggcttacagtaaggaggaagatctggaggcc agcgacctgcacaaggtgcgttactctggtattcggcctgctccaggctaccccagccag cctgaccatactgagaaacgcaccatgtggacactcgcccaaattcaggaaaaaaccggt atcagtctgactgaatcacttgccatgtctccggctgcagctgtgtctggtctctacttc gccaaccccaaatccacctactttgctgtgggcaagatcaccaaggagcaggcggaagat tatgctaggaggaaggagattcctgtgactgaggcagagaaatggctggcacccaacctg gcctacgacaccgacttagccacataa

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