Ictalurus punctatus (channel catfish): 108274508
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Entry
108274508 CDS
T04658
Symbol
trpc3
Name
(RefSeq) short transient receptor potential channel 3
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108274508 (trpc3)
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108274508 (trpc3)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
YVC1_C
Motif
Other DBs
NCBI-GeneID:
108274508
NCBI-ProteinID:
XP_017340202
Ensembl:
ENSIPUG00000012300
UniProt:
A0A2D0SBU7
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Position
14:complement(5481057..5524518)
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AA seq
895 aa
AA seq
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MSGKSRLSKYHKRVSVPEDDAEPCWKEENGGVDACYLKSVKSARDAPHYYRYNMKTVDSF
PAQRMTLQREKGRRQAIRGPAFMFNARGSSLTAEEERFLDAAEYGNIPVVRKMLEESPTL
NVNCMDYMGQNGLQLAVGNEHLEVTELLLRRENLARVGDALLLAISKGYVRIVEALLGHP
SFAGGERLTRSPCELQDDDFYSYDEDGTRFSPDITPIILAAHCHKYEVVHMLLIKGARIE
RPHDYFCKCADCTEKHRKDSFSHSRSRINAYRGLASPAYLSLSSEDPVLTALELSNELAK
LANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDTEEVEAILNGDVSAELAAGQHHRSLISR
VKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQSIAVKCLVVLVVALGLPLLAVGYW
FAPCSKLGKVLRSPFMKFVAHAASFIIFLCLLVFNASDRFEGISTLPNVTVTDYPLQIFR
VKTTRFSWTEILIMVWVAGMMWSECKELWTEGPREYILQLWNVLDFGMLSIFIAAFTARF
FAFLQAMKAQKYVDENIHAADLSLVTLPPDIKYFTYARDKWLPSDPQLISEGLYAIAVVL
SFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGMFILYSYYLGAKVN
SAFTTVEESFKTLFWSIFGLSEVSSVVLKYDHKFIENIGYVLYGIYNVTMVVVLLNMLIA
MINSSYQEIEDDSDVEWKFARSKLWLSYFDNGKTLPPPFSIVPSPKSFVHCISKLISLLR
CRRRQLNKDVELGTENSKSRLNLFTQSNLHMSESHSFNSILNQPTRYQQIMKRLIKRYVL
KAQMDKENDEVNEGELKEIKQDISSLRYELLEDKSQATEELSTLIQKLSEKMQAS
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcaaaagcaggctgtccaaataccataaaagggtgtcggtgcccgaggatgat
gctgagccgtgttggaaagaggagaacggcggtgtggatgcatgttacctgaaatccgtg
aagagtgccagagacgcgccgcactactaccgctacaacatgaaaactgtggactctttt
ccagcacagaggatgaccctgcagcgtgagaaagggcgtcggcaggcaattcgtggccca
gcattcatgttcaatgcacgtggaagcagcctgacagccgaggaggagcgtttcctcgat
gcagccgagtacggcaacatcccggtagtgcgtaagatgctggaagagtcacccacgctt
aacgtgaactgtatggactacatgggccaaaatgggctgcagttggccgtaggcaacgag
cacctggaagtgactgagctgctcttgcggcgcgagaacctggcacgtgttggcgatgcc
ctcctgctggccatctcaaagggctacgtgcgcattgtggaggcgttgctgggccaccca
tcattcgccggtggagagaggctcacgcgcagcccatgcgagctgcaggacgacgacttt
tattcatacgacgaagacggcactcgcttctcacctgacatcacacctatcatcctagcc
gcccactgccacaagtacgaagtggtgcacatgctgctgataaaaggtgcacgcatcgag
cggccgcacgactacttctgcaagtgcgccgactgcacggagaaacacaggaaggactcg
ttcagccactccaggtccagaatcaacgcataccgtggtctggccagccctgcatacctc
tcgctctccagtgaagaccccgttctcaccgccctggagctcagcaatgagctcgccaaa
ctggccaacatcgagaaggagtttaagaatgactacaggaaattgtctatgcagtgtaag
gactttgtggtgggcgtgctggacctgtgcagagacacagaggaggtggaggccatactg
aatggagacgtatctgcggagctggcggcgggccagcaccatcgctctctcatcagtaga
gtcaaactggctatcaaatatgaagtcaagaagtttgtagcccatcctaactgccagcag
cagctgttgactatctggtatgaaaacctgtcaggtctccgtgagcagtccattgcagtg
aagtgtctggtggtgctggtggtagctctaggcctccccctgctggctgtggggtactgg
tttgctccatgcagcaagctgggtaaagtcttgcgcagtcccttcatgaagtttgtggca
catgctgcgtccttcatcatcttcctctgcctgctggtctttaatgcatctgaccggttt
gagggcattagcactctgcccaacgtcacggtcacagactacccactgcagatcttcaga
gtgaagaccacccgcttctcatggaccgagatcctcatcatggtgtgggtggcaggcatg
atgtggtcggagtgtaaagagctttggacagaagggccgagggaatacatcctgcagctg
tggaacgttctggactttggcatgctgtccatcttcatcgcagcgttcaccgcccgcttc
tttgccttcctgcaggccatgaaagcgcagaagtatgtggacgagaacatccacgccgct
gacctctctctggtcacgctgccacccgatatcaagtacttcacgtacgcaagggataaa
tggcttccgtcagaccctcagctcatctcagagggcctgtacgccatcgctgtggtcctg
agcttctctcgtattgcttacatcctcccagccaacgaaagcttcggcccgctgcagatc
tctctgggacgcactgtgaaggacatcttcaagttcatggtgctcttcatcatggtcttc
ctcgcattcatgatcggcatgttcatcctctactcttactatctgggagctaaggttaac
tctgcctttaccacagtggaagagagttttaaaactttgttctggtccatatttggcttg
tctgaagtctcctccgtggtcctgaagtacgaccataagttcatagagaacattggctac
gtcctgtatgggatatataacgtaactatggtggtggttctgctgaacatgctcatcgct
atgatcaacagctcctaccaggagatagaggatgactcagatgttgagtggaagtttgcc
aggtctaaactctggctgtcgtatttcgataacggtaaaaccctgccgcctcccttcagc
atcgtgcccagccccaagtccttcgtccactgcatcagcaaactcattagcctgttgcgt
tgccgacggcgacagctcaacaaagatgtggagcttggcacggagaactccaagtctaga
ctaaacctattcacgcagtccaacttgcacatgagtgagtctcacagcttcaacagcatc
ctcaaccagcccacgcgctaccagcaaattatgaagcgtctcataaagcgttacgtcctg
aaagcgcaaatggacaaagagaacgacgaagtcaatgaaggcgagttgaaagagatcaag
caggacatctctagccttcgctacgagctgttggaggacaaatcccaggccacagaggag
ctctctacgctcattcaaaaactcagtgaaaaaatgcaggcatcataa
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