Ictalurus punctatus (channel catfish): 108275270
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Entry
108275270 CDS
T04658
Name
(RefSeq) exostosin-1
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ipu01100
Metabolic pathways
Module
ipu_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
108275270
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ipu01003
]
108275270
Enzymes [BR:
ipu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
108275270
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
108275270
Glycosyltransferases [BR:
ipu01003
]
Glycan extension
O-Glycan
108275270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
108275270
NCBI-ProteinID:
XP_053542407
Ensembl:
ENSIPUG00000011329
UniProt:
A0A9F7RLA3
LinkDB
All DBs
Position
2:2663612..2813358
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AA seq
730 aa
AA seq
DB search
MQAKKRYVLALAAACAMLLAYICTLHTTELQTHGDEPHFHALLQHAEQPYLFLEEVEPEE
YGPLVLLRREIQNNMYKSRRCRMDTCFDFGRCQGAFRVYVYPPGTSAVTGISENYRKVLA
AIEDSRFYTSDPSEACLFVLSVDTLDRDRLSPQYVQDVRTQIQNLPLWNDGRNHLIFNLY
SGTWPDYAEDLGFDVGQAMLAKASVDVQNFRPNFDVSIPLFSKDHPQKGGEKGYLTSNNV
PPARKYLLVFKGKRYLTGIGSETRNALYHIHNREDMILLTTCKHGKDWEKHKDARCDQDN
EEYSKFDYQELLHNSTFCLVPRGRRLGSFRFLEALQAACIPVLLSNGWELPFSEVIDWSK
AAIIGDERLLLQIPSITRSVDAERILALRQQTQFLWDSYFSSVDKIVLTTLEIIQDRIYT
YTSRSMLMWNSLPGGLYTLPRFSSYPTLFPFYYGLLGKTPQQEFTAVIQAVAPLQSPQQP
ILKLIIAVAKSKFCAQIIVLWNCDKPSPPRSKWPSISVPLTVIEEERKTMSGRFFPHDVI
RTDAVLSLDEDSVLSTNEVDFAFIVWHSFPERIVGYPGRSHYWDATKGRWGYTSKWTNEY
SMVLTGAAFYHRYYHFLYTHYLPSRLLSMVDQLANCEDILMNFLVSTVTKLPPIKVTQKK
QYKETMMQQGSKSSRWADPDHFAQRQSCMNSFAAWFGFMPLVHSQLRLDPVLFKDQVSIL
RKKYRDIERL
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaagaagcgctacgtgctagcattggcggcagcttgcgccatgctgctcgcc
tacatctgcactctacacaccaccgagctccagacgcacggtgacgagccgcattttcac
gcccttcttcagcatgctgagcagccatacctgtttctggaggaagtggaaccagaagag
tacggaccgctggtgctgctgcgccgcgagatccagaacaacatgtacaagagccgccgc
tgtcgcatggacacatgctttgacttcggtcggtgtcagggtgccttccgtgtctacgtg
tacccgccaggcacaagcgcggtcacgggaatttccgagaattaccggaaagttctggcg
gccatcgaggactcacggttctacacgagcgatccaagtgaggcgtgccttttcgtgctc
agcgtggacacgctggaccgggacaggctttcaccacaatatgtgcaggatgttagaact
cagatccagaaccttccactgtggaatgatggcaggaaccacctgatctttaacctgtac
tctgggacgtggcccgactatgctgaggatttgggttttgatgtaggccaggccatgttg
gccaaggccagcgtcgacgtgcagaacttcaggcccaattttgacgtgtccatacctctt
ttttccaaagaccacccccagaaaggtggggagaaaggttatttgacatccaacaatgtc
ccgcctgcacggaaataccttctagtgttcaaagggaagaggtatcttacaggaattggt
tcagaaaccaggaacgctttgtatcacatacataacagggaagatatgattttgctgacc
acctgcaagcacgggaaagactgggagaagcacaaagacgccaggtgtgaccaggacaat
gaagaatactcaaaatttgattaccaggagctgctacacaattcaactttctgcctggtg
cctcgtggccggagactcgggtctttccgttttctcgaagccctgcaggcggcgtgcatc
cctgtattactgagtaacggatgggagctgcctttctctgaggtcatcgactggagtaaa
gccgctatcattggagatgagagattattactgcagattccctccatcaccaggtctgtc
gatgcagagcgaatcttggctctgagacagcagacacagttcctgtgggactcctacttc
tcctccgtggataaaattgtcttaaccacattagagatcatccaggacaggatatacacc
tacacctcaagaagcatgctgatgtggaactctctccccggtggactctacacacttcct
cggttctcctcgtatcccacccttttccccttttactatggactcctgggtaagactccg
cagcaggagttcacagctgttattcaggcagtagctcctcttcagtctcctcagcagccc
atcctcaaactcatcatcgctgttgccaagtccaagttctgtgctcagatcatcgtgctg
tggaactgtgacaaaccttcacctcctagaagcaaatggccgtccatcagcgtccctctg
accgtcattgaagaagagagaaagacgatgagcgggcgttttttccctcatgatgtcatc
aggacggatgccgtgctcagcctggacgaggactcggttctgtccacgaatgaggtggat
ttcgctttcatcgtgtggcacagttttcctgaacggatagtcggatatccgggacgcagc
cattactgggacgccaccaaggggaggtggggctacacgtctaagtggaccaatgagtac
tcgatggtgctgacgggcgccgccttctaccacaggtactatcacttcctgtacactcac
tacctgcccagtcgactcctctccatggtggaccagctcgccaactgtgaagacattctc
atgaacttcctcgtctccacggtaaccaagctgccgccaatcaaagtcacgcagaagaaa
cagtacaaggagacgatgatgcaacagggttcgaagtcatcacgttgggccgacccagac
cacttcgctcagcggcagtcctgcatgaactccttcgccgcatggttcggcttcatgccc
ctcgttcactctcagctccgtctggatccggttctgtttaaagaccaggtctccatctta
cgcaagaaatacagggacatcgagagactgtaa
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