Ictalurus punctatus (channel catfish): 108275488
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Entry
108275488 CDS
T04658
Name
(RefSeq) transcription factor E2F1
KO
K17454
transcription factor E2F1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04110
Cell cycle
ipu04137
Mitophagy - animal
ipu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108275488
09143 Cell growth and death
04110 Cell cycle
108275488
04218 Cellular senescence
108275488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108275488
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
108275488
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GFIT
Motif
Pfam:
E2F_CC-MB
WHD_E2F_TDP
Motif
Other DBs
NCBI-GeneID:
108275488
NCBI-ProteinID:
XP_017341830
Ensembl:
ENSIPUG00000002064
UniProt:
W5UEW4
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Position
15:complement(7488862..7496112)
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AA seq
431 aa
AA seq
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MADTVVSAHSSEDLLVDFETLLNSGSIDLSADHQIVIISPACGNVELVQPRSAGTDLLLF
STPHSTMPLQRRDTMPGRPPVKRKLDLDNDHQYISTTRSPPPCPAPPATPGRPRVPRLST
EKSRYDTSLNLTTKRFLDLLAQSPDGVVDLNWASQVLDVQKRRIYDITNVLEGIHLISKK
SKNNIQWLGSRIDGASVARYQELQREVSELSDAEDKLDELINKCSLQLRLLTEDSENKMM
GYVRCQDLRSTVDPPDQIVIVIRAPPETQMTVTEPSEGYQISLKSTTGPIDVFLCPEDSS
GVCSPVTGCSPAKLSPHSPPRPASSAQEARSPTLPNTSPLPLVNETESMLDPFSGMSEIA
DFDPLTLGSSDFLLDRTGPGSGSGSDPFGLPIESFISLSPPHTQDYHFGLEDHEGISELF
DCDFTDLGPLF
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcggacacggtggtttctgctcacagctcggaggatctcctggtcgactttgagact
ctcctgaacagcggcagcatcgacctgagcgcagatcatcagatcgtcataatctctcca
gcatgcggcaacgtggaactcgtccagccccggagcgcaggaacggatctgctgctgttc
tccacgccgcacagcaccatgccactgcagcgtagagacaccatgccgggccgcccgccg
gtgaagaggaagttggacttggacaatgatcaccagtacatcagcactaccagatcacct
ccaccatgtcctgctcctcctgctacacctggacgtcccagagtccctcggctaagcacg
gagaaatcacgctatgacacgtccctgaacctcaccaccaaacgcttcctggacctgctg
gctcagtctccggacggcgttgtggacctgaactgggcctcacaggtgctggacgtccag
aagagacgcatctacgacattaccaacgtcctagagggcattcatctcatctccaagaaa
tccaagaacaacattcagtggcttggtagccgtattgacggtgcttcagtcgctcgttat
caagagttacagagagaagtgtctgaactgtccgacgctgaagataaattggacgaactc
attaacaagtgcagcctgcagctccgcctcctcactgaggattcagagaataagatgatg
gggtacgtgaggtgtcaggacctgcgcagcaccgtggaccctccggatcagatcgtcatc
gtgatccgagccccacccgagacgcagatgacagtcaccgagcccagtgaggggtaccag
atctccctgaaaagcactacggggcccatcgacgtgttcctgtgtcctgaggacagttct
ggagtttgtagtcctgtaacgggctgcagtcctgcaaaattgtccccccacagccctcct
cgtccggcctcgtccgcacaggaagcgaggtcgccgacgctcccgaacacctccccactt
cctttagtgaatgagacagagtcgatgctggacccgttctcgggtatgagtgagattgcc
gactttgaccccttgactctgggctcgtcagacttccttttggatcggaccggtcccggt
tctggttctggctcggatccctttggccttccgatcgagagcttcatcagcttgtctccg
ccccacacgcaggactaccacttcggtctggaggaccacgagggcatcagcgaactgttc
gactgcgacttcaccgaccttggacctctgttctga
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