Ictalurus punctatus (channel catfish): 108276278
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Entry
108276278 CDS
T04658
Symbol
ptpn11b
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type 11b isoform X1
KO
K07293
tyrosine-protein phosphatase non-receptor type 11 [EC:
3.1.3.48
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04148
Efferocytosis
ipu04517
IgSF CAM signaling
ipu04625
C-type lectin receptor signaling pathway
ipu04920
Adipocytokine signaling pathway
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108276278 (ptpn11b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108276278 (ptpn11b)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
108276278 (ptpn11b)
09152 Endocrine system
04920 Adipocytokine signaling pathway
108276278 (ptpn11b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108276278 (ptpn11b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108276278 (ptpn11b)
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
108276278 (ptpn11b)
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Non-receptor PTPs
108276278 (ptpn11b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
SH2
SH2_1
Tc-R-P
DSPc
PTP-SAK
PTPlike_phytase
Y_phosphatase3
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
108276278
NCBI-ProteinID:
XP_017343303
Ensembl:
ENSIPUG00000021336
UniProt:
W5UHY3
LinkDB
All DBs
Position
15:17961672..18004686
Genome browser
AA seq
591 aa
AA seq
DB search
MTSRRWFHPNITGIEAEQLLLTRGVHGSFLARPSKSNPGDFTLSVRRNDEVTHIKIQNSG
DYYDLYGGEKFATLAELVQYYMEQHDLLRERNGDVIELKYPLNCKDPTSERWYHGHLSGR
DAEKLLTEKGKPGSFLVRESQSKPGDFVLSVLTNEEKHENVDRKTKVTHVMIRYQDVKYD
VGGGEKFDTLTDLVEHYKKNPMVEKSGIVVHLKQPFNATRINAANIENRVRELNKVADSS
EKPKQGFWEEFEMLQQQECKLLYPRKEGQRAENKSKNRYKNILPFDTTRVTIREADPDVP
GSDYINANYIRSMQEEGRHVDEGKVFIATQGCLQNTVLDFWRMVYQENTHVIVMTTKEME
RGRNKCVRYWPDADTTKEFGNVRVRNMEEQAAQDYILRELEVTRTDRKEASRYIWHYQYL
SWPDHGVPNEPGGVLNFLEQVNQTQNAIPNTGPVIVHCSAGIGRTGTIIVIDILIDIINR
QGLDCDIDIPKTIQRVRQQRSGMVQTEAQYKFIYMAVQQYIDTAQKRLEEEQRNKTKERE
YSNIKYPQMTNTRALPNMSSSRSSSVMNDETASVYENVHIKKSPICTNSRR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgacttcccggaggtggttccacccgaacatcactggcatcgaggcagagcagctcctc
ctgacccgaggcgtccacggcagcttcctggctcgaccgagcaaaagtaacccaggagac
ttcacgctgtctgtcaggcggaacgacgaagtcactcacattaagatccagaattctggc
gattactatgacctgtacggaggggagaagttcgccactctagccgagttggtgcagtac
tacatggagcagcatgaccttctgcgagaaaggaacggagacgtgatcgagctcaaatat
cctctcaactgcaaagaccccacttctgagaggtggtatcatgggcatctgtcaggcaga
gatgcagaaaagctcctcacagagaaaggcaaaccaggcagttttctggtgagggagagt
cagagcaaacctggagactttgtgctgtctgttctcactaacgaggaaaaacatgaaaac
gtggaccgcaagacaaaggtcacccacgtcatgatacgctaccaggatgtgaagtatgac
gtgggtggaggggagaagttcgacacattgacagacttggtggagcactataaaaagaat
ccaatggtggagaagagtgggattgtcgtgcaccttaagcagccgttcaatgccactcgg
ataaatgcggccaacatcgagaaccgggtgcgagagttaaacaaagtggcagacagttct
gagaagcccaagcaaggcttctgggaagaatttgagatgctacagcaacaggaatgtaaa
ctcttgtaccccagaaaagaaggacagagagctgagaataagagcaaaaacagatacaag
aacattctaccctttgacaccacccgggtgacgatcagggaagcagatcccgacgtgccc
ggctctgactacatcaatgccaactatatccgaagtatgcaggaagagggccgtcatgtg
gacgaaggcaaagtgttcattgctactcagggctgccttcagaacacggtgctggacttc
tggaggatggtctatcaggagaacactcatgttattgtcatgacaaccaaggaaatggag
cgaggcaggaataaatgcgtacgctactggccagacgctgacacaacaaaggagtttggg
aatgtgcgtgtgaggaacatggaggagcaggctgctcaggactacatcctcagagagctg
gaggtcacacgtacagaccggaaggaggcttcccggtatatctggcactatcagtacctg
agctggcctgatcatggcgtgcctaatgaaccaggaggagttctcaactttcttgaacag
gtcaaccaaactcagaacgccattccaaataccggacctgtcatagtccactgcagcgca
gggatcggaagaacaggcacaataattgtgattgacatccttattgatatcataaacaga
caagggctggactgtgacatcgacatcccaaagaccatccagcgagtgcgtcagcagcga
tccggcatggtccagactgaagcccagtacaagttcatctacatggctgtacagcagtat
atcgacacagcacagaagagactggaggaggagcagaggaataagacaaaggaaagagag
tactccaatatcaagtaccctcagatgacaaatactagggccctgcccaacatgagctcg
tctcgctcatcatctgtaatgaatgatgaaacagccagtgtatatgagaacgtacacatc
aaaaagagccccatctgcacaaactccaggagatag
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