KEGG   Ictalurus punctatus (channel catfish): 108276459
Entry
108276459         CDS       T04658                                 
Symbol
vdra
Name
(RefSeq) vitamin D3 receptor A
  KO
K08539  vitamin D3 receptor
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ipu01009]
    108276459 (vdra)
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ipu03000]
    108276459 (vdra)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:ipu03310]
    108276459 (vdra)
Protein phosphatases and associated proteins [BR:ipu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108276459 (vdra)
Transcription factors [BR:ipu03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    108276459 (vdra)
Nuclear receptors [BR:ipu03310]
 1. Thyroid hormone like
  1I. Vitamin D3 like receptor
   108276459 (vdra)
SSDB
Motif
Pfam: zf-C4 Hormone_recep PCF11_charged
Other DBs
NCBI-GeneID: 108276459
NCBI-ProteinID: XP_017343635
Ensembl: ENSIPUG00000000797
UniProt: A0A2D0SMY3
LinkDB
Position
15:5681050..5747076
AA seq 428 aa
MVRKSTRISPVMEAMAVSTSAQCTDEIDRNAPRICGVCGDKATGFHFNAMTCEGCKGFFR
RSMKRKASFTCPFNGSCTITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKKELILK
RKEEEAMREAQKPRLTEEQSQIINTLVEAHHKTYDDSYSDFGKFRPPVREGPVTRSASRA
ASLHSLSDASSDSLNNSPESMDKKLSSLFSMCQDGVMSPESRDNPRLSMLPHLADLVSYS
IQKVIGFAKMIPGFRDLTAEDQIALLKSSAIEIIMLRSNQSFSLEDMSWSCGGPDFKYCV
NDVTKAGHTLELLEPLVKFQVGMKKLNMHEEEHVLLMAICLLSPDRPGVQDHVRIEALQE
RLCETLQAYIRVHHPGGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVL
EVFGSEVS
NT seq 1287 nt   +upstreamnt  +downstreamnt
atggttcgaaagtcaactcggatctccccagtaatggaggccatggctgtgagcacatct
gcacagtgtacggacgagattgaccgcaacgctccgcgaatctgcggcgtttgcggagac
aaggccactggattccacttcaacgccatgacctgcgaaggctgcaagggctttttcagg
cgcagtatgaagcggaaggccagtttcacttgtccctttaacggcagctgcaccatcacc
aaagacaaccgcagacactgccaagcctgtcgcctgaagcgctgcgtcgacatcggcatg
atgaaggagttcattctgactgatgaggaggtgcagaggaagaaggagctgatcctgaag
agaaaggaggaggaggcaatgcgggaggcgcagaagccccggctgaccgaggagcagagt
cagatcatcaacacgctggtggaggcgcatcacaagacctacgacgactcctactccgac
tttgggaaattccgacccccagtgagagagggtccagtgacgcgcagtgccagtcgtgct
gcctctctccattcactctcagatgcctcttcagattcattgaacaactcaccagagtct
atggacaaaaagctcagcagtctcttctccatgtgtcaggacggcgtgatgagcccggag
tccagggataacccccgcctctccatgctgccccacctggccgacctcgtcagctacagc
atccagaaagtgatcggctttgccaagatgatccccggcttcagggatctgactgcagaa
gatcagatcgctctgctgaagtccagcgctatcgagatcatcatgttgcgctccaaccag
tccttcagtctggaagacatgagctggagctgtggaggacccgactttaaatactgcgtc
aacgacgtcaccaaggctggtcacactctggagctgctggagccactggtgaagtttcag
gtggggatgaaaaaactcaacatgcatgaagaggaacacgtgctgctcatggccatctgt
cttctctctccagatcgtcccggcgtgcaggaccacgttcggatcgaggcgttgcaagag
cgtttgtgcgagacgctgcaggcgtatatccgtgtgcaccacccaggcggccggcttctc
tacgccaagatgatccagaagctggctgacttgcgcagcctgaacgaggagcactccaag
cagtaccgctcgctgtccttccagccagagcacagcatgcagctcacaccactcgtgctc
gaggtgttcggcagcgaggtgtcctag

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