Ictalurus punctatus (channel catfish): 108276459
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Entry
108276459 CDS
T04658
Symbol
vdra
Name
(RefSeq) vitamin D3 receptor A
KO
K08539
vitamin D3 receptor
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108276459 (vdra)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108276459 (vdra)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ipu03310
]
108276459 (vdra)
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108276459 (vdra)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108276459 (vdra)
Nuclear receptors [BR:
ipu03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
108276459 (vdra)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
Motif
Other DBs
NCBI-GeneID:
108276459
NCBI-ProteinID:
XP_017343635
Ensembl:
ENSIPUG00000000797
UniProt:
A0A2D0SMY3
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All DBs
Position
15:5681050..5747076
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AA seq
428 aa
AA seq
DB search
MVRKSTRISPVMEAMAVSTSAQCTDEIDRNAPRICGVCGDKATGFHFNAMTCEGCKGFFR
RSMKRKASFTCPFNGSCTITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKKELILK
RKEEEAMREAQKPRLTEEQSQIINTLVEAHHKTYDDSYSDFGKFRPPVREGPVTRSASRA
ASLHSLSDASSDSLNNSPESMDKKLSSLFSMCQDGVMSPESRDNPRLSMLPHLADLVSYS
IQKVIGFAKMIPGFRDLTAEDQIALLKSSAIEIIMLRSNQSFSLEDMSWSCGGPDFKYCV
NDVTKAGHTLELLEPLVKFQVGMKKLNMHEEEHVLLMAICLLSPDRPGVQDHVRIEALQE
RLCETLQAYIRVHHPGGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVL
EVFGSEVS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaaagtcaactcggatctccccagtaatggaggccatggctgtgagcacatct
gcacagtgtacggacgagattgaccgcaacgctccgcgaatctgcggcgtttgcggagac
aaggccactggattccacttcaacgccatgacctgcgaaggctgcaagggctttttcagg
cgcagtatgaagcggaaggccagtttcacttgtccctttaacggcagctgcaccatcacc
aaagacaaccgcagacactgccaagcctgtcgcctgaagcgctgcgtcgacatcggcatg
atgaaggagttcattctgactgatgaggaggtgcagaggaagaaggagctgatcctgaag
agaaaggaggaggaggcaatgcgggaggcgcagaagccccggctgaccgaggagcagagt
cagatcatcaacacgctggtggaggcgcatcacaagacctacgacgactcctactccgac
tttgggaaattccgacccccagtgagagagggtccagtgacgcgcagtgccagtcgtgct
gcctctctccattcactctcagatgcctcttcagattcattgaacaactcaccagagtct
atggacaaaaagctcagcagtctcttctccatgtgtcaggacggcgtgatgagcccggag
tccagggataacccccgcctctccatgctgccccacctggccgacctcgtcagctacagc
atccagaaagtgatcggctttgccaagatgatccccggcttcagggatctgactgcagaa
gatcagatcgctctgctgaagtccagcgctatcgagatcatcatgttgcgctccaaccag
tccttcagtctggaagacatgagctggagctgtggaggacccgactttaaatactgcgtc
aacgacgtcaccaaggctggtcacactctggagctgctggagccactggtgaagtttcag
gtggggatgaaaaaactcaacatgcatgaagaggaacacgtgctgctcatggccatctgt
cttctctctccagatcgtcccggcgtgcaggaccacgttcggatcgaggcgttgcaagag
cgtttgtgcgagacgctgcaggcgtatatccgtgtgcaccacccaggcggccggcttctc
tacgccaagatgatccagaagctggctgacttgcgcagcctgaacgaggagcactccaag
cagtaccgctcgctgtccttccagccagagcacagcatgcagctcacaccactcgtgctc
gaggtgttcggcagcgaggtgtcctag
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