Ictalurus punctatus (channel catfish): 108276500
Help
Entry
108276500 CDS
T04658
Name
(RefSeq) beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X1
KO
K00725
(N-Acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase [EC:
2.4.1.92
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00600
Sphingolipid metabolism
ipu00604
Glycosphingolipid biosynthesis - ganglio series
ipu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
108276500
09107 Glycan biosynthesis and metabolism
00604 Glycosphingolipid biosynthesis - ganglio series
108276500
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ipu01003
]
108276500
Enzymes [BR:
ipu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.92 (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase
108276500
Glycosyltransferases [BR:
ipu01003
]
Glycan extension
Glycolipid
108276500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glycos_transf_2
FKRP_N
Vpu
Motif
Other DBs
NCBI-GeneID:
108276500
NCBI-ProteinID:
XP_017343713
Ensembl:
ENSIPUG00000008606
UniProt:
A0A2D0SLY0
LinkDB
All DBs
Position
15:complement(20884352..20894692)
Genome browser
AA seq
530 aa
AA seq
DB search
MCVQRMKVLVGFVILELLLAVLFYHWARRAPTVIHSQKKLDSPIEKLLERNEQLNNRSNS
IPYHLKQTTARRNENGCVCEGDTRSFNVPFSDLFFPRVGAEELYSSFRASELEEIKKRRH
HEYNNFLRRSNTAANHLIIAEANIPLQYPTQGLQVQPKKSILIPGLGLKLKSRKVYSVNC
TASMGTFDVAALVDGVSINGEGKMHISLSSPLLSALNRQLQFVTYTNTIFHPDTADIVQF
RTDGFQAAFTIQIRHAITPKLYDPGPTGPKGEYNIGRLVTIATKTFLRYDKLQDLIDSIR
RFYPTVTIVIADDSEHPKPVTGPYIEHYIMPFKKGWFAGRNLAVSQVTTKYVLWVDDDFI
FTSNTRLEKMVDVLERSSLDLVGGAVREVTGYTATYRHIISTEKGGEDGDCLHIRKGFYH
GLEGFPNCVVTDAVINFFMAYTEKVRQVGFDPRLARVAHMEFFIDGLGVFHVGSCDDVIV
NHASKIKGMLPWGQSETDKAYAKFRYTNSWSNQTAHIYFKNHFKCLTSNS
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgcagagaatgaaggttttggtgggttttgtgatactagaactattactcgct
gttctcttttatcactgggccagaagagctccaactgtgatacacagtcaaaagaaacta
gattcccctatagagaagcttcttgaacgtaatgaacagttgaacaacaggagcaacagc
attccctaccacctcaaacaaactacagcacgcagaaatgaaaatgggtgtgtttgtgaa
ggagacacgaggagttttaatgtgcccttcagtgacctgttctttcctcgggtgggtgct
gaggagttgtactcttcattcagagcctcagagctggaggaaataaagaagcgcagacac
cacgagtacaacaacttcctgaggagatcaaatacagcagcaaaccatcttatcattgct
gaggcaaacattcctcttcagtaccccacccagggtttgcaggtccagcctaaaaagtcc
attttaattcctgggttgggtctgaaacttaagtcaaggaaggtttattcagtaaattgt
actgctagcatgggtacatttgacgtagcagctttggtggatggagtcagcataaacggg
gaaggaaaaatgcacataagcctctccagccctcttctatctgcacttaacagacagctg
cagtttgtcacttatacaaatacaatttttcatcctgatactgcagacatagtgcaattc
aggactgatggattccaagcagcctttaccattcaaatcagacatgcaatcactcctaaa
ctttatgatcctggacctactggacctaaaggagaatacaacataggcaggcttgtgacc
attgctacaaaaacatttctgcgttatgacaagctgcaagatttgatcgacagcattcga
cggttctatccaacggtcacgatagtcatagctgatgacagcgagcatcctaagcctgta
actggcccttacatagagcactacatcatgcctttcaaaaagggttggtttgctgggcgt
aatctggctgtctctcaagtgacgactaagtatgtgctgtgggtggatgatgacttcatc
ttcacctctaatacaaggttggagaaaatggtggacgttttagagcgcagcagtttagac
ctggtaggaggagcagtcagagaggtaacaggatacactgccacctatcgtcatattatc
tcaacagaaaaaggtggagaagatggagactgtttacacattagaaaaggcttctatcat
ggtcttgagggcttccctaattgtgtggtcacggatgccgtcattaatttcttcatggcg
tataccgaaaaggtgcggcaagtgggcttcgaccctcgcctggcacgagtcgcacacatg
gagtttttcatcgatggccttggtgttttccacgtgggttcctgtgatgatgttatagtc
aaccatgcatcaaagatcaaagggatgttgccatgggggcaatcagaaactgataaggcc
tatgctaaattccgttatactaacagctggagcaatcaaactgctcatatttacttcaag
aaccacttcaaatgcttaacgagtaacagttaa
DBGET
integrated database retrieval system
