KEGG   Ictalurus punctatus (channel catfish): 108276800
Entry
108276800         CDS       T04658                                 
Name
(RefSeq) protocadherin gamma-C5-like
  KO
K16497  protocadherin gamma subfamily C
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ipu04515]
    108276800
Cell adhesion molecules [BR:ipu04515]
 Cadherins
  Protocadherins
   108276800
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 BppU_N AGRB_N
Other DBs
NCBI-GeneID: 108276800
NCBI-ProteinID: XP_053542772
UniProt: A0A9F7RTJ3
LinkDB
Position
16:4128253..4132601
AA seq 824 aa
MAKRTWFGGWRCLLFWLFLFLLLWINAQGQTRYSVPEELNVGSVVGNIAKDLGLKISELY
DRKLRIASESGKQYFSVNLGKGELVVDERIDRESLCGQNANCLLPVQVIIEDPLQLYRID
VEIQDINDNYPHFQSTERALKIAESTVPGMRFPLESAQDPDVGSNSLKSYTLSKDECFSL
KVKDLGDGRKVPELVLEKSLDREKKALHQLMLTALDGGNPVKSGTSQINITVLDNNDNNP
VFNNAVYKVSINENSSRGTSVLKVDATDLDEGTNGEIQYSFGERTPDAVRSLFLIDPQTG
EIILNGQLDFETTPTYNIEVSATDKGIPEMEGHCNVHIDVLDVNDNPPQIVLTSKPSPVR
EDAPSGTVVALISARDFDSGVNGKVILHTQPEVPFILKSTFSNDYSLVTNGILDREMFPE
YSVEITAFDSGSPSLSSKKTISVQILDVNDNPPKFPDNSFKAYVKENNNPGSIVCSVSAS
DLDVGDNAKISYSIIDSKVQDMPLSSYFYINSDNGSIFSMHSFDYEKMKVFQIQVQAKDH
GSPSLSSNATVHVFIVDQNDNAPAIIYPSALMGSVSHQRMPRSAKAGHLVTKVTAVDADS
GHNAWISYRLAEATDASLFTVTLHTGEVRTKRSVSEQDDSSQRLLIEIKDNGEPLQSTTV
TVDILIEDGFHEPIADFRHKHTEPEKKNSKITLYLIISLASVSLLCLVTFLVLLVKCARS
SRGSSSCCIRRSDCEYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFGSYLSPMSEF
SDFTLVKPSSTTDFTNTLSVLDASLPDSTWTFECQQVRKKCALR
NT seq 2475 nt   +upstreamnt  +downstreamnt
atggcaaaaaggacgtggtttggaggctggaggtgtcttttattctggttgtttctcttt
cttcttttgtggattaacgcacaaggccagactcgctattccgttcccgaggaattgaac
gtcggctccgttgtcggaaatattgctaaagaccttggcttgaaaatatccgagctttat
gatcgtaaattgcgaatagcctccgaatcaggtaagcagtatttcagtgtgaatttagga
aaaggtgagctggtggttgatgaaaggatcgacagagagagcctttgtggacagaacgca
aactgtctgctgccagttcaagtcataatcgaggatcctctccagctttacagaatagat
gttgaaatacaggatataaacgacaattatcctcattttcagtcaaccgagcgcgcacta
aaaatcgcagagtccaccgtgcctggaatgcgcttccccctggaaagtgcacaagaccca
gatgtaggaagtaattctttaaaatcgtacacgctgagcaaagatgaatgcttcagctta
aaagtcaaggatcttggtgatgggcgtaaagtgcccgagttggttttggagaaatccctt
gaccgtgagaagaaagctttacatcagctgatgcttactgcactggatggtggaaatccg
gtcaaatcaggcacttctcagataaatatcactgtccttgataacaatgacaacaatccg
gtatttaacaatgcggtatataaagtaagcattaatgaaaactccagtcgggggacgtca
gtgttaaaagttgacgctacagatttggacgagggcacgaatggtgaaatacagtactcg
tttggagagcgcacacccgacgcagtgcgctcattgtttctcattgatccacagacgggc
gaaatcattttgaacgggcagctggatttcgaaaccactccgacgtacaatatcgaagtc
agtgccacagataaggggatccctgaaatggaaggccactgcaatgttcatatcgacgtt
ttagacgtgaatgacaacccaccacaaatcgtgctcacgtccaaaccgagcccagtgcgc
gaggacgcaccgagtggcaccgttgtagcgttaataagcgctcgcgactttgactctggc
gttaatgggaaagttattttacacacccaacccgaggttccttttatactgaaatcgact
ttctccaatgattattctttagtgacgaatggaattttagatcgggaaatgttcccggag
tatagcgtagaaatcaccgcgtttgattcaggctctccttcgttgagtagcaaaaaaaca
atttccgttcaaatccttgatgttaatgataatccaccaaaatttcctgataactcgttt
aaggcatacgtcaaagagaacaacaacccaggttcgattgtttgttctgtctcagcttca
gaccttgatgtcggagacaatgccaaaatatcttattctataattgactccaaagtccag
gacatgcccctgtcgtcttatttctacattaactcagacaacgggagcatttttagcatg
cactcgtttgattatgagaagatgaaagtgtttcaaatccaagtccaggcgaaagatcac
ggctctccgtctctgagcagcaacgccacggttcatgtttttatcgtggaccagaacgac
aatgccccagctatcatttacccctccgcactcatgggctccgtgtctcatcagagaatg
ccccgctccgctaaagcaggacacctcgttactaaagtcacagcagtggacgctgactcg
ggccataacgcctggatttcctatcggctagcggaggccacggacgcgtctctgttcact
gtcactttacatacaggagaggtgaggactaagcgctctgtttcagagcaggatgactcc
tctcagagactgctcatagagataaaggacaacggagaaccgctgcagtccaccacagtc
actgtggatatactgatagaggacggctttcatgaaccaatcgcagactttagacacaaa
cacacagaacctgagaagaaaaatagcaaaatcacattatatctcatcatttctcttgcc
tccgtgtcattgttgtgtttggtgacatttttggtcttgttggtaaaatgcgctcgaagc
agtagaggcagctcgagttgctgtatcagacggagcgattgtgaatataaaaaccccaac
agaaacctgcagatccagctcaacactgacggacccattaaatatgtggaggtgctggga
ggagacatgatgtctcagagtcagtccttcggctcgtatctctctccaatgtccgaattc
agtgatttcaccctcgttaagcccagcagcactacagactttacgaatactctgagcgtg
ctcgatgcgtctttaccggacagcacgtggacgtttgagtgtcagcaggtgagaaaaaaa
tgcgctttgcgttaa

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