Ictalurus punctatus (channel catfish): 108276906
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Entry
108276906 CDS
T04658
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3 isoform X1
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108276906
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108276906
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108276906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
wHTH_TTC3
TTC3_9th
zf-RING_2
zf-rbx1
TPR_1
zf-C3HC4
TPR_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
TPR_11
zf-ANAPC11
zf-RING_5
zf-RING_11
TPR_17
PAM2
zf-RING_Vps41
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
108276906
NCBI-ProteinID:
XP_017344481
UniProt:
A0A2D0SPQ7
LinkDB
All DBs
Position
16:complement(12576451..12625633)
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AA seq
1813 aa
AA seq
DB search
MESFRHEMFESEDSDIEDTADVVRHKTKIVYHDKFPYIHMEPPDVLYERWGKIDPELRRL
AGHLLHVSVFWWHILYKQQDNHSTTAWAVDMGFLDYNVSNDLSLKRLQRIEILELILDTV
EKCLASTDPERKARELIMISMSFRMEDDGLMKAISWLTESGSPGFSRRLLQLGSKQIRYQ
VLDFVFSEYSRYIQVMSCSKKKMFRELSLEPDKWCLLKSEEMKNKGNEQFQKKKFDLAVK
WYSKAIKFHTNNHILYGNRALCYIRCEKYLKAMGDGKRAILLQRDWAKGHYRFCDALFFL
GARDKAVESNIAAQSYCSADPEGMRDLQQQYSRFMTEMSEGRSRGRAPACSEADGKQKKT
EARKGSSKRHEGACGVDPDKAPEATHSSDTAENKQKAEDTKQDELTGKPVTLPQTEDFFT
DTISEMGDRKAKKAASGIPEKQSVRTKQPPTQEKAQSSSNEVCSKEQFCAAVRDAHIALS
DQRCRNAEQSFSEALRILHSTGTKDLCISELDRTLLIYGYATALIEIGQPEELAEAQRQC
EKLSSSANRTFQSLVHYGLGKVLLKEHKFSKAKEEFLKALLMVQRQIMPGKLTWPTTKVT
VEETCPEYLKEQLERLIETCKFPPKPDAVCRHCLGQAVIYFTDPDFKGFIRLSCCQNCKV
EYHINCWRKFKAASFSDKNDKDFLQDLCFTPDCTGTICRIVIFDSTGLIKCEFKSPISKS
KVPGMRVKQKCTSLKKLKSKEERKLRRKQRRAETSISENEMNNLKMEDRPEKGSDCGIDQ
SSLKDCVVYGDRVLHQLDKNRDLFNDESHNISSMVVCLKPWMKLDEDKGHVSVLKDCAEP
QLLRELVDLLLERKNRVWARLFLHNLSDCQDVKPKVHEWAQQLNNAGLKAAEHFIGQFGD
ELEKLDLSYLLEFPPLHDIFHNKSFTVIEYLRQAPPQEMRLFIWTLEEYREHYPSWFTIL
DDYFEMDAICLVLKKTEKVDPLSSVYRSKSKNRKKKQKEPKSVLLLSGIRRDEEDDFFFE
EDSLMLLHGGDPFSVPDFLREQVAEFEGQYVNPGSSNRYKKYLDNDPDPTKESLYDYFAQ
ILEEHGPLEVSDPLLVGELKNFPLEAQQKIDAAGGLEHFLLGSLRFVMHGHLVGLTLHAV
GLQHNVDDSLFPNFPSHSCSFDDSEPKGSSYLNPTAKEFLPQLKHLSLEDSSESYDHATC
PVLPSPYAFVPSIPLNLNGAFELTDTATLELDGAECLDYFPGVLMNALNTEVLSSDNYIN
LEDACPKSKTSFVQTLWGSKDTRDDVAINTEPYAQFEKNRGDMTQTEKNNIKFEKHIQNM
REMLKAFQNKRKESCSILDAEVRDINQHIEISNKELTLFQQKLEDEVRKDQQEKRDHQER
LKVLKGEIKELGDFQDSMSKLIQDKNVKYQIDLEHFLAISNKWAAEKMSLEEKIKKCRDQ
CAKAASRSLAGQVTILKNRRDHGLRGLRKYLSDGKAIIKRVTEMSSTCPSASFSSIIEAW
KSYVQEVEEKIVRIETQYEEQIELVKNGTSLSSLPAVGVPSTPSPPLVPAFLHPLSNQEP
VLQQLPVQHAHPHTPYGAQQHPARHQTHMSVNTHQAMHTPPAASEKVAAPAPPAVSGPVQ
PPQPLVVFERILDRLSSMFPHYSRSVLTQFIQEVRSVNFGSLSTLKYEDVINRTAQLILD
HQEHSQEQMYSTSRDMAGVRGLAVPSPTPSTDSSRATATPPPAHVWKSMSSQHRKSSRAL
NMEDPCIICHDDMVPEDLCVLECRHSFHRECIKSWLKEQSTCPTCREHALLPEDFPMLPG
RHRRGHVHTETFS
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtttcagacatgaaatgttcgagtctgaagattctgacattgaggacacagca
gacgtggtccgacacaagactaaaattgtttatcacgacaaatttccatacatccacatg
gagccacctgacgttttgtacgagcggtggggtaaaattgatcccgagctgagaagactg
gcgggacacttgctgcacgtctcggtgttctggtggcatattctgtacaagcagcaggac
aatcacagcactacagcctgggcggtggacatgggcttcttggactacaatgtttcaaat
gatttgagtttgaaaaggctgcaaagaattgaaatcttggagctcattcttgacactgtg
gaaaaatgtctggcgagcacggatcctgagaggaaagcaagagagttgatcatgattagc
atgtcttttagaatggaagatgatggtcttatgaaggcaatcagctggctaacggaatct
ggttctccaggttttagcaggaggctccttcagcttggatcaaagcaaatacgctaccaa
gttctagattttgtattttctgagtattctcgttacatacaggtgatgtcatgtagcaaa
aagaagatgtttagggagctgtcgttagagccggataaatggtgtttactgaaaagtgaa
gaaatgaagaacaaagggaatgaacaatttcagaagaaaaagtttgatcttgcagtgaaa
tggtactcaaaggccattaaattccataccaacaaccacatcttgtacgggaacagagca
ctctgctatattcgttgtgaaaaatacctgaaagcaatgggtgatgggaagcgagctatt
ctactgcagcgagactgggcaaagggccactatcgtttctgtgatgccttgttcttcctt
ggagctagagacaaagcagtagaatccaacattgcagctcagagctattgcagtgctgat
ccggagggaatgagagacctccagcagcagtacagtcgcttcatgactgagatgtctgag
ggtagaagtagaggcagagctccagcatgttcagaggctgatggaaaacagaagaaaact
gaggctaggaaaggatccagtaaacgacacgagggagcatgtggagtagatccagacaaa
gctcctgaggcaactcatagctctgatactgcagaaaataagcagaaagcagaagacaca
aagcaagatgaactaacaggtaaacctgtgactctccctcaaactgaggacttctttaca
gacactataagtgaaatgggggaccgaaaggcaaaaaaagcagcgtcaggcattccagag
aagcagtctgtaaggactaaacagcctcctacacaggaaaaggcccagagcagcagcaat
gaagtgtgcagcaaggagcagttttgtgctgcagtacgggacgctcatattgcgctcagt
gaccagcgctgccgcaacgcagagcagtcattctctgaggcgctcaggattctgcactca
actgggaccaaggatctctgtatatctgaactggacagaacgttgttgatctatggttac
gctacagccctgatagaaatcgggcaacctgaggagttggcggaagctcagcggcagtgt
gaaaaactaagctcctcagcaaacagaacgttccagtccttggttcattatggtttagga
aaggttttactgaaggagcacaaatttagtaaagccaaagaggaatttttaaaggctctg
ttgatggttcagaggcagatcatgccaggaaaactgacctggccaaccactaaagtaact
gttgaagagacctgtcctgaatatttaaaagagcagcttgagaggcttattgagacctgc
aaattcccccctaaaccagatgcagtttgccggcattgcttgggacaagcagttatctat
ttcacagatccagactttaagggcttcattcgattgtcatgctgtcagaactgcaaggtg
gagtatcatatcaattgctggagaaagttcaaagctgcttcattttctgacaagaatgac
aaggattttctgcaggatttatgttttactcctgactgtacaggtacaatctgtcgaatt
gtgatatttgactcaactggtcttattaagtgtgagtttaaatcgcctatttctaaaagc
aaagttcctgggatgagagtcaaacagaaatgtacaagtcttaagaagttgaaatctaaa
gaggaaagaaagctgaggcggaaacaacgaagggcggagacatccatatctgagaatgag
atgaacaatttaaaaatggaagatagacctgagaaaggatcagactgtggcattgaccag
tcatcgctcaaggactgtgttgtgtacggagatcgtgttttacaccaacttgataaaaac
cgagatctttttaacgatgagagtcacaatatttctagtatggtggtgtgtctgaaacca
tggatgaagttggatgaggataagggtcatgtaagcgtgttaaaggactgtgcagaaccg
cagcttctcagggagctagtggatctgctgctggagagaaagaacagggtttgggccaga
ctgtttcttcataacctcagtgactgccaagacgtcaagcccaaagtgcatgaatgggct
cagcaacttaacaatgctggtctgaaagctgctgagcactttattggtcaatttggtgat
gagctggaaaaactggatctctcttacctgttggagtttcccccactacatgatatattt
cataataagagcttcactgtaatagagtacctgagacaagccccgccacaagaaatgcgc
ctctttatttggactctagaggaataccgagaacactacccctcctggttcactatactt
gatgactattttgaaatggatgcaatatgtttagtgttaaagaagacagaaaaagttgac
cccttaagttctgtttataggagtaaaagcaaaaatcgaaaaaagaagcagaaagaaccg
aagtctgtcttgcttctatcgggaataagaagagatgaagaggacgatttcttctttgag
gaagattcactgatgctgcttcatggtggtgatccctttagtgttccagattttttgagg
gagcaggttgcagagtttgagggccagtatgtcaaccctggaagctctaaccgctataag
aaatatttggacaatgacccagatccaactaaagaaagtttatatgattactttgcacag
attctggaggagcatggacctcttgaggtgtcagacccactgcttgtgggcgagctgaag
aactttccccttgaggcgcagcaaaagatcgacgctgctggaggacttgaacatttcctg
ctcggatctctcagatttgtaatgcatggccacctcgtcggattgacgttgcacgcggtg
ggcttgcagcacaatgtggatgactctctatttcccaactttccctcccattcttgcagc
ttcgatgattcagagcctaaaggatcctcctatctcaaccccacagccaaagaattcctg
ccccagttgaaacatttgagtctggaagacagcagtgaatcttatgaccacgctacatgt
cctgttctccccagtccctatgcttttgtcccttcgattcctctgaatttaaatggtgca
tttgagctgactgatactgcaactttagaacttgatggagcagagtgtcttgattacttc
cccggtgtgctaatgaatgcactgaacactgaggttctcagctctgataattatattaat
ttagaagatgcatgtcctaaaagtaagactagttttgttcagacactttggggtagcaaa
gataccagagatgatgttgcaattaatacagaaccatatgcacagtttgaaaagaacaga
ggagatatgacccaaacagaaaaaaacaacataaaatttgaaaaacacatccaaaatatg
agggaaatgcttaaggcttttcaaaacaaaagaaaggagtcatgttctatacttgatgct
gaagtgagggacattaatcagcacatagagatttccaacaaagaattgactttgttccaa
caaaagcttgaggatgaggtacggaaagatcagcaggagaagagagaccaccaagagagg
ctgaaggttttgaagggtgaaatcaaagagctgggggattttcaggacagtatgtccaag
ttaatccaggataagaatgtgaagtatcagattgatctggagcatttccttgcaataagt
aacaaatgggcagctgagaagatgagtttggaggagaaaataaagaaatgtagggatcag
tgtgcaaaagcagccagtcgatcactggcaggacaggtgaccatcctgaaaaatcggcgg
gatcatgggctgcgtggtctgaggaagtacttgtcagatgggaaggcaattataaaacgc
gtgactgagatgtcctccacatgtccatctgcttctttcagttccatcattgaggcctgg
aaatcatatgtacaggaagttgaggagaagatcgtcagaatcgagacccagtatgaagag
cagattgagcttgtgaaaaacggcaccagcctgtcctctctccctgcagttggcgtacca
agcaccccttctcctcctctagtaccggcctttcttcatccattatccaatcaggagcca
gttttgcagcagctccctgtgcagcatgcacacccacacaccccatatggagctcagcag
catcctgccagacatcaaacacacatgtcggtaaacacgcaccaggccatgcacacacct
ccagcagccagtgagaaagttgctgctccagcgccccctgcagtctcagggccagttcag
cctccacagcccctcgttgtatttgagaggatcctagatcgtctcagctccatgttccct
cactacagcagatcggtcctgacacaatttattcaagaggtccgctctgtgaattttggc
agtctgagcacgttgaagtatgaagatgtgattaacagaactgctcaactcatccttgac
caccaggagcactcacaagagcagatgtactcgacgagtagggatatggctggagtgaga
ggtttagcagtacccagtccaactcctagcactgattcctccagagctactgcaacaccc
ccacctgcacatgtgtggaaaagcatgtcctctcaacatcgcaagtcttccagagctctg
aacatggaggacccttgcattatttgtcatgatgatatggtgccggaggacctgtgtgtg
ctggagtgtcgccatagcttccatagagagtgcatcaagtcatggctgaaggagcagagc
acttgtcccacctgccgagagcatgcacttttacctgaggatttccccatgctgccagga
cgacatcgacggggacacgtgcatacagaaaccttctcttaa
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integrated database retrieval system
