Ictalurus punctatus (channel catfish): 108276915
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Entry
108276915 CDS
T04658
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108276915
Peptidases and inhibitors [BR:
ipu01002
]
Metallo peptidases
Family M10
108276915
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
Peptidase_M66
DUF4953
SpoIIP
Motif
Other DBs
NCBI-GeneID:
108276915
NCBI-ProteinID:
XP_017344515
Ensembl:
ENSIPUG00000020837
UniProt:
A0A2D0SQF1
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All DBs
Position
16:2720427..2723205
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AA seq
464 aa
AA seq
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MKTYYQLCILVALVFRVRSVPLSTDMSDEEFAKNYLKELYDMQEDNTPSFGRKVSEMSLK
LSEMQEFFGLKVTGTLDAETLEMMKQPRCGVPDVAAYRAESFSNKWPTNKLTYRIENYTP
DMSVAEVDDSIKRALQVWARVTPLKFKRIYSGVADIMISFVVGDHGDGSPFDGPDGFLAH
AFGPADGIGGDTHFDDAETFTFKSSNGYNLFLVAAHEFGHALGLDHSTDPGALMYARYTY
RDVDSFVLPRDDVRKIQALYGSNPDIPDKPEPTPPSTPNACDPSLVLDAVTTLRGETYFF
KNKFFWRHHPQIPQNEQFLIKSFWPELPDDIDAAFEDPSADLVYIFKGQKVWALSGYDVV
NRKSLGSFRLPAKVKNIDAAVYDESTGKMLFFVGKSYYSYDTNNKKMDKGYPKQVEERFP
GMTGKVTAAFQNNGFTYLFSGPRVFEFNESTLRRVLGNKHFLQC
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaagacttactaccagttgtgcattctcgttgccctggtgttcagggttcgctcagta
ccactgtctactgacatgagcgatgaagaatttgcgaagaattacttgaaggaactgtac
gacatgcaagaggacaacacgccgtcctttgggcgcaaggtcagtgagatgagcttgaag
ctgagtgagatgcaggagtttttcgggttaaaggtgacaggaactctggacgctgaaacg
ctggagatgatgaagcaacctcgctgcggcgttccagatgtggctgcgtacagggctgaa
tctttcagtaacaaatggcccaccaacaaattgacctacaggattgagaattacactccc
gacatgtctgtggctgaagtggacgactctatcaagagagcgctgcaagtctgggctcga
gtcactcctctgaagttcaaacgcatctacagcggtgtagccgacatcatgatctcattt
gttgtcggagatcatggtgatggctccccatttgatggacccgatggtttcttggctcat
gcatttggccccgctgatggcatcggcggagatactcattttgatgacgccgagaccttc
actttcaaatcgtccaatggatacaacttgttcttggtggctgcgcatgaatttggacac
gccctgggccttgaccattccaccgatcctggagctctcatgtacgcaaggtacacctac
agagatgtcgacagcttcgtccttcctcgagacgacgtcaggaaaattcaggctctctat
ggctcaaaccctgacatacccgataagcccgagcccacacctccgtccactcctaatgcc
tgtgaccccagtctggtcctggacgccgttacgaccctgcgtggagagacgtacttcttc
aaaaataagtttttctggcgccaccaccctcagatccctcaaaacgaacaatttctgata
aagagcttctggcccgagcttccagatgatatcgatgctgcttttgaggatccatcagct
gacttggtgtacatctttaaaggtcagaaggtctgggccctcagtggttatgacgtcgtg
aatcgcaagagtctcggtagcttcaggttgccggctaaagtgaagaacatcgacgctgcc
gtttatgatgagtctactggaaagatgttgttctttgttgggaaatcatactacagctat
gacacgaacaacaagaagatggacaagggttaccctaaacaggtggaagagagattccca
ggaatgacaggaaaagtgactgccgccttccagaacaacggtttcacctacctcttcagt
ggaccacgcgtattcgagtttaacgaatcaacgctgaggcgcgtgctgggaaacaaacac
ttcttgcaatgttag
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