Ictalurus punctatus (channel catfish): 108276916
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Entry
108276916 CDS
T04658
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108276916
Peptidases and inhibitors [BR:
ipu01002
]
Metallo peptidases
Family M10
108276916
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Peptidase_M66
Reprolysin_5
Reprolysin_4
Peptidase_M54
DUF4953
SpoIIP
Motif
Other DBs
NCBI-GeneID:
108276916
NCBI-ProteinID:
XP_017344516
Ensembl:
ENSIPUG00000020884
UniProt:
A0A2D0SPT7
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All DBs
Position
16:2728705..2731253
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AA seq
459 aa
AA seq
DB search
MKTYYQLCVLIALTFRVHSGPILSSTGKDREELATNYLKRLSRMDEDNTPSSGPKVSKMQ
DFLKLNVTGTLDTETMEMMKKPRCGVPDVASYKDRVLNYKWSTKNLTYRIENYTPDMSVA
EVDDSIERALQVWARVTPLKFTRIYSGIADIMISFTVGDHGDGSPFDGPNNLLAHAFGPA
DGLGGDTHFDDDETFTFKSPNGYNLFLVAAHEFGHALGLNHSSDPGALMNARYTYRDVDS
FVLPRDDVRKIQALYGSNPDIPDKPEPIPPSTPNACDPSLVLDAVTTLRGETYFFKNKFF
WRHHPQIPQNEQFLIKTFWPELPDDIDAAFEDPSADLVYIFKGQKVWALSGYDVVNRMNL
SSFRLPAKVKKINAAVYDESTGKMLFFVGKSYYSYDTNKKKMDKGYPKLVEERFPGMTGK
VTAAYQYSSFTYLFSGTSIFEFSETVLMRVLGNNYFLQC
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaagacttactaccagctgtgtgtcctcattgccctgacgttcagggttcactcaggt
ccaatactgtcatctactgggaaggatcgtgaagaattagcaacgaattacttgaagaga
ttatccagaatggacgaggacaacacgccgtcctctgggcccaaggtcagtaagatgcag
gactttttaaagttaaatgtgacaggaactctggacactgaaacgatggagatgatgaag
aagcctcgctgtggcgttccagatgtcgcttcatacaaagacagagttttaaattacaaa
tggtctacaaagaacttgacctacaggattgagaattacacacccgatatgtctgtggct
gaagtggacgattctatagagagagcgctgcaagtctgggctcgagtcactcctctgaag
ttcacgcgcatctacagtggtatagccgacatcatgatctcatttactgtcggagatcat
ggtgatggctccccatttgatggacctaataatctcttggctcatgcatttggccccgct
gatggcctcggcggagatactcattttgatgacgacgagaccttcactttcaaatctccg
aatggatacaacttgttcttggtggctgcgcatgaatttggacacgccctgggccttaac
cattccagtgatcctggagctctcatgaacgcaaggtacacctacagagatgtcgacagc
ttcgtccttcctcgagacgacgtcaggaaaattcaggctctctatggctcaaaccctgac
atacccgataagcccgagcccatacctccgtccactcctaatgcctgtgaccccagtctg
gtcctggacgccgttacgaccctgcgtggagagacgtacttcttcaaaaataaatttttc
tggcgccaccaccctcagatccctcaaaacgaacaatttctgataaagaccttctggccc
gagcttccagatgatatcgatgctgcttttgaggatccatcagctgacttggtgtacatc
tttaaaggtcagaaggtctgggccctcagtggttatgacgtcgtgaatcgcatgaatctc
agtagcttcaggttgccggctaaagtgaagaagatcaacgctgccgtttatgatgagtct
actggaaagatgttgttctttgttgggaaatcatactacagctatgacacaaacaagaag
aagatggacaagggttaccctaaactggtggaagagagattcccaggaatgacaggaaaa
gttactgcagcctaccagtacagtagtttcacctaccttttcagtggaacaagcatattc
gagtttagtgaaacagtgctgatgcgcgtgctgggaaacaactacttcttgcagtgctag
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