Ictalurus punctatus (channel catfish): 108277226
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Entry
108277226 CDS
T04658
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00280
Valine, leucine and isoleucine degradation
ipu00650
Butanoate metabolism
ipu00900
Terpenoid backbone biosynthesis
ipu01100
Metabolic pathways
ipu03320
PPAR signaling pathway
Module
ipu_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
108277226 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
108277226 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108277226 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
108277226 (hmgcs1)
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
108277226 (hmgcs1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
108277226
NCBI-ProteinID:
XP_017345250
Ensembl:
ENSIPUG00000001731
UniProt:
A0A2D0SSG9
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Position
16:18768221..18781234
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AA seq
526 aa
AA seq
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MFVSPITMPGSVPASYSDTWPKDVGIIAMEVYIPSQYVDQAELEEFDDVGAGKYTIGLGQ
ARMGFCSDREDINSLCLTVVQRLMERNCLSYDSVGRLEVGTETIIDKSKSVKTVLMQLFE
ESGNTDVEGIDTTNACYGGTAALFNAVNWVESSSWDGRYALVVAGDIAVYATGSARPTGG
AGAVAMLVGPNAPLAFDRGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCY
SVYRNKIQAQWQREGLERRFSLKDFGYMVFHSPYCKLVQKSLARLLLNDFLSHPNPDMES
GPFSGLEAFRDVKAEDTYFDRDVEKAFMKASAEMFEQKTKASLLISNQNGNMYTPSVYGC
LASILAQFTPQELAGQRIGLFSYGSGFAATLYSIRVTQDATPGSTLDKLVSSLSDLQARL
DSRKKVPPAVFADNMKLREETHHLANYVPQGSVDELFPGTWYLTRVDEKHRRYYTRRSLD
EHGPLEAGLLNSVTASEHIPSPVKKMPRIPATTAVPEAVTITNGEH
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtaagtccgatcacaatgcctggttctgtccctgcgagctattcagacacttgg
cccaaagatgtgggcatcattgctatggaggtctacattccctcccagtatgtagaccag
gcggaactggaggagtttgatgatgttggagcagggaagtacaccatcggtcttgggcaa
gcgcgaatgggtttctgctcagaccgggaggacattaactcgctgtgtctgaccgtggtg
cagcggcttatggagagaaactgcttgtcgtatgacagcgtgggaagactcgaggtgggc
acagagaccatcatcgacaagtcgaagtcagtgaagacagtattaatgcagctgtttgag
gaatccggaaatacagacgtggagggaatcgacaccactaacgcatgctacggaggcacc
gctgctcttttcaacgctgtcaactgggtggagtccagctcctgggacggtcgctacgct
ctggttgtggctggagatatcgcggtgtatgcaacaggcagtgccaggcctacaggaggc
gctggagcagtggccatgttggtagggcctaatgcacctctggcatttgatagaggccta
cgagggacccatatgcagcacgcgtatgatttctataagcctgatatggtgtcagagtat
cctgtagttgatggcaagctctccatccagtgctacctcagtgcattggacagatgttac
tctgtctaccgcaataaaattcaagcccagtggcaaagagagggccttgagagacgtttc
agtctgaaagactttggctacatggtcttccattctccctattgtaaactggttcagaag
tctctggctcgactcctgctcaacgacttcctgtctcatcccaaccccgacatggagagt
gggcctttcagcggcctggaggccttcagggatgtgaaggctgaggacacatattttgac
cgtgatgtggagaaggccttcatgaaagccagcgcagagatgtttgagcagaaaaccaag
gcctccctgctcatatccaaccagaatggcaacatgtacacaccatctgtgtatggttgt
ctggcttccattctagcacaatttacacctcaggagttggcaggtcagagaattggcttg
ttctcatacggatcaggcttcgctgccacactctactcgatcagagtgacacaagatgct
acacctggctctacgctagataaactggtttccagtctgtcagatctgcaggcccgactg
gactctaggaagaaggttccacctgctgtctttgcagacaacatgaagcttagagaggag
acccatcacttggcaaactacgtcccccagggttcagtggacgagttgttcccaggaaca
tggtatctaacgcgtgtggatgagaaacaccgcagatattacactagacgttccctggat
gaacacggacctctggaggcaggacttcttaattccgtgaccgcgtccgagcacatcccc
agcccggtgaagaagatgccccgcatcccagccaccactgctgtccctgaggcagtcact
attactaatggggaacattga
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