Ictalurus punctatus (channel catfish): 108277255
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Entry
108277255 CDS
T04658
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37 isoform X1
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108277255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108277255
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108277255
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108277255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
HlyD_2
zf-C3HC4_2
LAMB1
DUF7194
BORCS6
Motif
Other DBs
NCBI-GeneID:
108277255
NCBI-ProteinID:
XP_017345317
Ensembl:
ENSIPUG00000018650
UniProt:
A0A2D0SRI6
LinkDB
All DBs
Position
16:complement(5013210..5026284)
Genome browser
AA seq
992 aa
AA seq
DB search
MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
RELVNCRWAEEVTQQLDTLQLCNLSKHEENDKDKCENHHEKLSVFCWTCKKCICHQCALW
GGMHGGHTFKPLAEIYEQHVNKVNEEVAKLRRRLMELISLVQEVEKNVEAVRGAKDERVR
EIRNAVEMMIARLDNQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELILK
SPEILLMFQQVHRKPMQSFVTTPVPPDFTSELVPAYDSSTFVLANFSTLRQRADPVYSPP
LQVSGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASNDPTKNII
REFASDFEVGECWGYNRFFRLDLLASEGYLNMQTDTLILRYQVRSPTFFQKCRDQYWYIS
QLEAAQSSYIQDINTLKERMDIQHYRRQNSRSSSPPDHRMCPPTSTTGAAAPSGRDSRPG
KIATMEDGLLVNGDQTKEEEEEEEEEKTQHEDSNELSDGDLEVDCLTGDEDVNPLDGSST
SGSSTATSNTEENDIDEENMSGENDVEYSGNLDLEEGEIPDDVIGATGDHLYIPQHSLAS
IWNSGRGWGLKSEGGSSAGIRGSRRSAAGATASLLEIDPVILIQLLDLKEHSHVESLWGI
QPRPPASLIPSQAALVSARKERERRSQAVRRSAPDSAVLTRLKAQMAEVRSKMADVKGQL
EARAGVSDARVTPLCSVLDHNASTDPETAARRKPRELDLLFKAPGTNRHGRHGGKKAVSP
KQEVGGAVGGVSLRRRGDAVEKELRGAAGDALEPSLCPREGPSTAESQCSVKAQSARASP
PSVPSSSENRPKLDESLYGAAGSDIFDLPVLSTAPPAGSKQRRTTCSTAALLTDTSLDFE
HDCSGDIHQSLLSLTEPPSSSSCPEEGLLCQKPSTHLLPGMSSDSEVECDTEYENEDEAG
VLEDGEVLSLPCSEEQLMPDDLSFVTGDTTER
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcagagcgtcgagagtatagcggaggtgtttcgctgcttcatttgtatggag
aagctgcgggatgctcgtctctgcccccactgctccaaactctgctgcttcagctgtata
cggcgctggctgacggagcagagggcacagtgtccacactgccgggctccgttacagctg
cgggagctggtgaactgtcgctgggccgaggaggtcacgcagcagctggacacactgcaa
ctctgtaatctctccaaacacgaggagaacgacaaagacaaatgtgaaaaccaccatgag
aagctgagtgtgttctgctggacttgtaagaaatgcatctgtcatcagtgtgcactgtgg
ggaggcatgcacggaggacacacgtttaagccacttgctgagatttacgagcagcacgtc
aacaaggtcaacgaggaggtggctaaactcagacgccggctcatggagctcatcagcctg
gtccaggaagtggagaagaatgtggaggcggtgcgaggggcgaaggacgagcgagtgcga
gagatcaggaacgctgttgagatgatgattgcacggttggacaatcagctcaagaacaaa
ctcatcacactcatgggccagaagacgtccctcacgcaggagacggagctgctcgagtct
ctgctgcaggaagtggagcatcagctgcgctcatgcagtaagagtgagctgatattgaag
agcccggagattctgctcatgttccagcaggtccaccggaagcccatgcagtccttcgtc
accacacctgtaccacctgacttcaccagtgagctggtccctgcttacgactcgagcact
tttgttctggcaaacttcagtacactgagacagagagcggaccccgtgtacagccctcct
ctccaggtatcgggactgtgctggaggctgaaggtttaccctgacgggaacggcgtcgtg
cggggaaattacctgtccgttttcctggagctgtcggccggcctgcccgagacctccaag
tatgagtaccgcgttgagatggtgcaccaggcttccaacgacccgaccaagaacatcatc
cgagagttcgcgtcggactttgaggtgggcgagtgttggggctacaaccgcttcttcaga
ctggatctgctcgctagcgagggttacctcaacatgcagaccgacaccctcatcctgagg
tatcaggtgcggtctcccaccttcttccagaagtgccgtgatcagtactggtacatcagc
cagctggaggcggcgcagtccagctacatccaagatatcaacactctgaaggagaggatg
gacattcagcattaccggcggcagaattctcgcagctcgtcccctccggatcaccgcatg
tgccctcccacgtccaccaccggcgccgctgccccgtcgggccgagactcccgccccggg
aagatcgctacaatggaggatgggttgctggtgaacggagaccagacgaaagaggaggag
gaagaggaggaagaggaaaagactcagcatgaggactcgaacgagctgtctgacggtgac
ctggaggtggactgtctgaccggagacgaggacgtgaaccctctggacggcagcagcacg
tccggcagctccacggccaccagcaacacggaggagaacgacatcgacgaggagaacatg
tccggagagaatgacgtggagtacagcggaaacttggacctggaggaaggagaaattcct
gatgatgttattggagccacaggtgatcacctctatattcctcagcacagtttggcatca
atctggaactcaggaagggggtggggcctaaagtctgaaggaggctccagcgcaggaatc
cggggttcgaggaggagcgcagcaggagccacggccagtctgctggagatcgacccggtc
atcctgatccagctcctggacctgaaagagcacagccatgtggagtctctgtggggaatc
cagccccggccgcccgcctcgctgatccccagccaagcggccttggtttcggcccgtaaa
gagcgagagcgtcgttctcaggctgtgcgccgctctgccccggactcggccgtcctgacc
cgactcaaggcccagatggcagaggttcgcagcaagatggcagatgtgaaggggcagctg
gaggcccgtgccggcgtctctgatgctcgtgtcactcctctgtgctcggttctggatcac
aatgcctcaaccgacccggaaacggcagcaagacgcaaaccacgagaactggacctgctg
tttaaagctcccgggacgaacagacacggccggcacggtggcaagaaagctgtctctccc
aagcaggaagtgggaggagcggtgggaggagtctctctgcgccggcgtggtgatgctgtt
gagaaagagctgagaggagcagcaggagacgctctcgaaccatcattgtgccctagagag
ggcccctccactgcagagagtcagtgttcggtgaaagctcagagtgcgcgcgcgtcccct
ccgtctgtccccagttcctctgagaaccggcccaaactggacgagtctctgtacggagct
gcggggagcgacattttcgacttgcccgtcctgagtaccgcgcctcctgcaggcagcaaa
cagcgcaggaccacctgcagcactgctgcgctgctgaccgatacatcgttagatttcgag
catgactgctccggagacatccaccaatcactgctgagtctcacagagccgccatcttcc
tcctcatgccctgaagaagggttgctgtgtcagaagccgtctacgcacctgttgccaggt
atgagcagtgacagtgaggtggagtgtgatacagagtatgaaaatgaggacgaggctgga
gttctggaggatggagaagttctctcactgccctgctcagaagagcagctaatgccggat
gatctgagctttgtgactggggataccactgagaggtga
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