Ictalurus punctatus (channel catfish): 108277615
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Entry
108277615 CDS
T04658
Symbol
otx5
Name
(RefSeq) orthodenticle homolog 5
KO
K09337
cone-rod homeobox protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108277615 (otx5)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108277615 (otx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
TF_Otx
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
108277615
NCBI-ProteinID:
XP_017345917
Ensembl:
ENSIPUG00000019269
UniProt:
A0A2D0ST95
LinkDB
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Position
17:complement(2113936..2120497)
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AA seq
294 aa
AA seq
DB search
MMSYIKQPHYAVNGLTLSGPGMDLLHSAVGYQNTPRKQRRERTTFTRAQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQPKPRPPKKKSSPNRDTT
SDPANTNAIANAPYSPVAPPPPAPPTAITPSSTGTNANASVSIWSPASVSPLADPLCVSS
KTAYAMTYAQTPAYAPAYATSSSYFSGLDCSSYLSPMHAPLSATGSGPLSPIGSSSSMAL
GQSQVSQGYGPASLGFSTIDCLDYNKDQTAWKLNFGAADCLDYKDQNSWKFQVL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacattaagcagcctcattacgcagtgaacgggttaacgctgtccggcccg
ggcatggacctcctccactccgccgtcggctaccagaacacaccccggaagcagcggcgt
gagagaaccacgttcacacgcgcgcagcttgatgtgctcgaggcgctgttcgctaaaacg
cgttatcccgacatcttcatgcgcgaggaggtggcgctaaaaatcaacctgcccgagtcc
agagttcaggtctggttcaaaaaccgtcgtgctaagtgtcggcaacaacagcaacagagc
agcggacagccgaaacctcggcctcccaaaaagaaatcgtcccctaacagagacacgacc
tctgaccctgcaaatactaatgctattgctaatgcgccctacagtccagtggctccaccc
cctccagccccaccgacagccatcactccaagctcaactggcacaaatgctaacgcgagt
gtctccatctggagccctgcgtccgtctcgccattggctgatccactctgcgtgtcgagt
aaaaccgcgtacgcaatgacgtacgctcagactccagcctacgctccggcctacgcaact
tcctcgtcttatttcagcggcctagattgcagctcatacctctccccaatgcacgcacca
ctctcagctactgggagtggcccccttagccctataggctcttcctcttccatggctctg
ggccaatcacaggtctcgcaaggttatggccccgcctccctcggttttagcaccattgat
tgtctggactacaataaagaccaaacagcttggaagctcaacttcggtgcagcagattgc
ctggactacaaagaccagaattcctggaagttccaggtgttatag
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