Ictalurus punctatus (channel catfish): 108279174
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Entry
108279174 CDS
T04658
Symbol
tnfrsfa
Name
(RefSeq) tumor necrosis factor receptor superfamily, member a
KO
K04722
tumor necrosis factor receptor superfamily member 10A/B
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04060
Cytokine-cytokine receptor interaction
ipu04115
p53 signaling pathway
ipu04210
Apoptosis
ipu04217
Necroptosis
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108279174 (tnfrsfa)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108279174 (tnfrsfa)
04217 Necroptosis
108279174 (tnfrsfa)
04115 p53 signaling pathway
108279174 (tnfrsfa)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108279174 (tnfrsfa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ipu04050
]
108279174 (tnfrsfa)
04090 CD molecules [BR:
ipu04090
]
108279174 (tnfrsfa)
Cytokine receptors [BR:
ipu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
108279174 (tnfrsfa)
CD molecules [BR:
ipu04090
]
Proteins
108279174 (tnfrsfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
Motif
Other DBs
NCBI-GeneID:
108279174
NCBI-ProteinID:
XP_017348688
Ensembl:
ENSIPUG00000007274
UniProt:
A0A2D0T184
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Position
18:complement(2173292..2196249)
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AA seq
432 aa
AA seq
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MGKELTMEHTVFLLMLALTAASSRAAELGFQLNQTAKQHVCLENQQYPHKGFCCENCEAG
TYVKEKCTADLEKGTCERCKEGTYAEHPTGMDQCLQCSPCPAGQIITEACTNTRDTKCEC
KSGTFCLPDEPCEVCKKCTRCKADEIEERPCTPTSNTKCKKRPSSPHDPTVTPTISPAPR
NESNGTVVIFIVVVCVLLSVIVPIALAVWKKTRLCGKRASPVAQNHDVKIPIDGVSVRTS
EECENSHNAGLEEAELPRTELRPLLLQETLSPGGKSIPVEDEDRGLGDSLPNTTSSSQTS
LSALPVNMSPSVSANEKEVEPWAREDGTPRRLVPLLAEEVSLSKSFDLFDVLDVRVHNKF
FRSIGVNDNAIKLAESHNASDKVYELLRVWMQREGLRANINHLLQALLDLDQRYSAEQIA
SRSVERGYYKYE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagagctcacgatggaacacacggtttttcttctcatgctggctctgacggcg
gcgagcagccgagcagccgagctcggcttccagctgaaccagacggccaagcagcacgtg
tgtctggagaaccagcagtatcctcataaggggttctgctgcgaaaactgcgaggccggc
acctacgtgaaggagaagtgcaccgcggatctggagaagggaacgtgtgaacgatgcaag
gagggcacctacgccgagcacccgaccggcatggaccagtgccttcagtgcagtccgtgc
cctgcaggtcagataataacagaggcgtgcacaaacacgagggacacgaagtgtgaatgc
aagtccgggactttctgtctgccagatgagccctgtgaagtatgcaagaagtgcactagg
tgcaaagcggatgaaatcgaggagcgtccatgcactccgacctccaacacgaagtgtaaa
aaacggccttcatcacctcacgaccccaccgtgacgcccacaatctcacctgcaccccga
aatgaaagtaatgggaccgtagtgatttttatcgtggtggtttgcgtgcttctaagcgtc
attgttcccatcgctctggcggtttggaagaagacacgactctgtggaaaacgagcaagc
ccagtggctcaaaatcatgacgtaaagattccaatagacggtgttagtgtccgtacctct
gaggagtgtgagaacagccataacgcgggattagaggaggcggagctgcctcgcactgag
cttcgtccgctcctgctgcaggagacgcttagcccagggggtaaaagcatcccggtggaa
gacgaggaccgaggacttggggacagcctaccaaacaccaccagctcctcccagaccagt
ctgtcagccctgccagtcaacatgtcaccttctgtctcagcaaatgagaaggaggtggag
ccatgggccagggaggatggcacacccagaagacttgttccattacttgccgaggaggtg
tctctaagcaagagcttcgacctgtttgacgttctggatgtgcgcgtgcacaacaagttc
tttcgcagcatcggcgtaaacgacaacgccatcaagctcgccgagtcgcacaacgccagc
gacaaggtgtacgaactgctgcgcgtgtggatgcagcgcgagggactccgcgccaacatc
aaccacttgctgcaggcgctgctcgacctcgaccagcgctactcggccgagcagatcgcg
tcccgctcggtcgagcgcggatactacaaatacgagtga
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