Ictalurus punctatus (channel catfish): 108279510
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Entry
108279510 CDS
T04658
Name
(RefSeq) glutamate receptor ionotropic, kainate 2
KO
K05202
glutamate receptor, ionotropic kainate 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108279510
04082 Neuroactive ligand signaling
108279510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108279510
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Glutamate (ionotropic)
108279510
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
108279510
NCBI-ProteinID:
XP_017349302
Ensembl:
ENSIPUG00000017281
UniProt:
A0A2D0T314
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Position
19:7420003..7478451
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AA seq
912 aa
AA seq
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MGRISTRLSARIVGFPPRLLLLLLLLALFTGCSHAMPHVLRFGGIFESIESGPSGAEELA
FKFALNTINRNRTLLPNTTLTYDIQRINVFDSFEASRKACEQLSLGVAAIFGPSHSSSAN
AVQSISNALGVPHIQTRWKHQVSDNRDSFYVSLYPDFSSLSRAILELVYFFRWETVTVVY
DDSTGLIRLQELIKAPSRYNIRLKIRQLPAETKDAKPLLKEMKKAKEFHVIFDCGHEMAA
WILKQALSMGMMTEYYHYIFTTLDLFALDMEPYRYSGVNMTGFRILNTESAQVSSIIEKW
SMERLQAPPKPDSGLLDGFMTTDAALMYDAVHVVAVAVQQAQQITVSSLQCNRHKPWRLG
GRFMSLIKEASWDGLTGRVLFNKTNGLRTDFDLDVISLKEEGLEKIGTWEPLSGLNMTEH
HKSKAANVTNSLSNKSLKVATILEEPYVMFKKSDKPLCGNDRFEGYCVDLLRELAAILGF
HYEIQLVEDGKYGAVEESTGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTL
GISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCN
PDSDMVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLA
AFLTVERMESPIDSADDLAKQTKIPYGVVEDGATMTFFKKTKISTYDKMWEFMNSRRQSV
MVKSVEEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQVGGLIDSKSYGVGTPMGSPYRD
KITIAILQLQEAGKLHMMKEKWWRGNGCPEEESKEASALGVQNIGGIFIVLAAGLVLSVF
VAVGEVLYKSKQNAQMEKRSFCSAMVDELTVSLKCQRRLKQKPQPPTIVKTEEVINMHTF
NDRRLPGKETMA
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgggcagaatcagcacgcgcttatctgctcggattgtcggtttcccaccgagactactc
ctgctgctgctgctgctcgcgctcttcacaggctgcagtcacgccatgccgcacgtcctg
agattcggagggatttttgagtctattgagagtggtccttctggtgctgaggaactggcc
ttcaaatttgcactgaacaccatcaacaggaaccggacgctgctgcccaacaccacgctc
acctacgacatccagaggatcaatgtctttgacagctttgaggcctcaaggaaagcttgt
gagcagctttctttaggtgtggcagccatatttgggccatcacacagttcctcagccaat
gcagtgcagtccatctccaatgcactaggagtgccacatatccagaccagatggaaacac
caagtgtcagataatcgcgactcattctacgttagtctctatcctgacttctcctctctc
agccgtgccatcctggagctcgtttacttcttcaggtgggagacagttacagtggtgtac
gacgacagcacgggtttgattcgtctgcaggagctgatcaaagctccctctagatacaac
atccgtctgaaaatccgccagctccctgcagagactaaggatgccaaaccacttcttaaa
gagatgaaaaaagcaaaagagtttcacgtcatctttgactgtggccatgagatggctgcg
tggatactcaagcaggctctctctatggggatgatgacagagtattatcactacatcttc
acaacactggatttgtttgcattagacatggagccataccgctacagcggtgtgaacatg
accgggtttcggatcctaaacacggagagtgctcaggtgtcttcaatcatagaaaagtgg
tctatggagagactacaggcccctccgaaacctgactcaggactactggatggattcatg
acgacagatgcagcgctgatgtatgatgcagtgcatgttgtagcagtagccgtgcagcag
gcacagcagatcactgtgagctctctacagtgcaaccgacacaagccctggcgcctcgga
gggaggttcatgagtctcattaaagaggcttcgtgggatggtctgacagggcgagttctc
ttcaacaaaaccaatggcttgagaacggactttgatctagatgtgatcagtctgaaggaa
gaaggactggaaaagattggcacatgggaacctctgagtggcttaaacatgacagagcat
cataagagtaaagcggccaatgttacaaactccttgtctaacaaatcactaaaggtcgcc
actattctggaagagccctatgtgatgtttaagaagtcggataaacctctctgtggtaat
gatcgcttcgagggctattgtgtggacttgctgcgtgagctcgccgctattcttggattc
cattacgagatccaattggtggaggatgggaagtatggagcagtagaggagagcactggc
cagtggaacggcatggtgcgagaacttatagaccataaagcagatctggcggtggctccc
ttagccataacatatgtgagggagaaggtgatcgatttttcgaagcccttcatgactctt
gggatcagcatcctgtaccgcaaacccaatggcacaaaccctggcgtcttctccttcctc
aatcccctttcccctgatatctggatgtatattctgctggcttacttaggtgtcagttgt
gtgctgtttgtcatagccaggttcagcccatatgagtggtataatcctcatccctgtaac
cctgattcggacatggtggagaataacttcactctactaaatagtttctggtttggagtt
ggggctctcatgcaacaagggtctgagctgatgcccaaggctctgtctaccagaatagtt
ggaggaatctggtggttcttcaccttgattatcatttcatcatacacagcaaaccttgct
gcgttcctcactgtggagagaatggagtctcccattgactcagctgatgacctggccaag
caaacgaagatcccctatggtgtagttgaagatggtgctaccatgacattcttcaagaag
acaaagatctctacttacgataagatgtgggagttcatgaacagcaggaggcaatctgtg
atggtaaagagtgtagaagagggcatccagcgagtgctgacttctgactatgcattcctc
atggagtccaccacaattgaatttgtcactcagcgcaactgcaatctcacacaggttgga
ggcctcattgattccaagtcctatggagtgggaacacctatgggctctccttaccgagac
aagatcactatagcgatcttgcagttgcaagaagcaggaaagcttcacatgatgaaagag
aaatggtggcggggaaatggttgtccagaggaggaaagcaaagaggcaagtgcactggga
gtgcaaaacatcgggggcatctttatcgtgctggctgcaggcttggtcctctctgttttt
gtggctgtaggggaagtgttatacaagtccaaacagaatgcacagatggagaagcgatcg
ttttgtagcgccatggtggacgagctaactgtgtctctgaagtgtcagcggcgactcaag
caaaaacctcagcctcccactattgtcaaaactgaggaagtgataaacatgcacaccttc
aatgacagaagactgccaggaaaagagaccatggcttga
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