Ictalurus punctatus (channel catfish): 108279728
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Entry
108279728 CDS
T04658
Name
(RefSeq) E3 ubiquitin-protein ligase Mdm2
KO
K06643
E3 ubiquitin-protein ligase Mdm2 [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04068
FoxO signaling pathway
ipu04110
Cell cycle
ipu04115
p53 signaling pathway
ipu04120
Ubiquitin mediated proteolysis
ipu04144
Endocytosis
ipu04218
Cellular senescence
ipu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108279728
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
108279728
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108279728
09143 Cell growth and death
04110 Cell cycle
108279728
04115 p53 signaling pathway
108279728
04218 Cellular senescence
108279728
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
108279728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108279728
04121 Ubiquitin system [BR:
ipu04121
]
108279728
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108279728
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
108279728
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
MDM2/MDM4 proteins
108279728
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
SWIB
zf-RING_2
Zn_ribbon_RanBP
SWIB_eIF2D
P22_portal
Motif
Other DBs
NCBI-GeneID:
108279728
NCBI-ProteinID:
XP_017349640
Ensembl:
ENSIPUG00000024445
UniProt:
A0A2D0T493
LinkDB
All DBs
Position
19:25740074..25749698
Genome browser
AA seq
473 aa
AA seq
DB search
MATENCLSSSQINKIDNEKLVRPKVQLLTLLKDAGADKDVFTMKEVMFYLGKYIMSKELY
DKQQQHIVHCGNDALGTVLGVTSFSVKEPRALFAMISKNLIAVKIPDSQSTFRERRAVSE
AERGPEETNPQSSTSTQQQQQQQQQQQQQQQQQQRRRRRSSDPASLSAEDEPGEPRKRHK
SDSISLTFDDSLSWCVIGGLRRERQSSESSVSHSNSEVGISHSDESEECDDTDSDNFSVE
FEVESIDSDAYSENDEDSLPGEDEVYEVTIIAEDEDSFDEDTEITEEDYWKCAECEELNP
PLPRHCKSCWKVRPGWLPETFFTSENPGNDVQTDVNTDLEPKAPCAESPTPTLDPDEGVD
VPDGKSTRSQSTSCSDSQGSSLCYSQPSTSSGQEDTPELERTTSSNSIESCLPASCLEPC
VICQSRPKNGCIVHGRTGHLMACYTCAKKLKKRNKLCPVCREPIQSVVLTYVS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggctacggagaactgtctgagcagttcacagatcaacaagattgacaacgaaaagctg
gtaagacccaaagtgcagttgctaaccctgttaaaagatgcaggtgcggataaggacgtg
ttcaccatgaaggaggttatgttctacctgggcaagtacatcatgagcaaggagttgtat
gacaagcagcagcagcacatcgtgcactgtggaaacgacgccctcggcaccgtgctcgga
gtgaccagcttctccgtcaaagaaccacgagctttgtttgcaatgatttctaaaaatctc
atagcagtgaaaattccagactcccagtcgacgtttagagaacgtagagctgtaagtgaa
gctgagcgagggccagaggagacaaacccccaatcatctacctccacacaacagcagcag
cagcagcaacaacaacaacaacaacaacaacagcagcagcagcgcaggagacggcggagc
agtgatcccgcgagtctctcggccgaggacgaacccggcgagcctaggaagaggcacaag
tccgacagcatctccctgacgtttgacgacagcctgtcgtggtgcgtgatcggaggcctg
cgcagagagagacagagcagcgagtcttcagtatcgcacagcaattcggaagtaggtata
tctcacagtgacgagagtgaagaatgtgacgataccgactccgataacttcagcgtagag
ttcgaggtggagtctatcgattcggacgcttacagcgagaacgatgaagactccctaccc
ggcgaagacgaggtctatgaagttacaataattgccgaggacgaagactcttttgatgaa
gatacggagatcactgaggaggactattggaaatgtgccgagtgtgaagagctgaaccct
cccctccctcgccactgcaaaagctgctggaaggtccgcccgggatggctccccgagact
ttcttcacgtccgagaaccccggcaacgacgtgcaaaccgacgtcaacacggacctcgaa
cccaaagcaccgtgcgccgaatctccgactccgaccctcgacccggacgaaggcgtggac
gtcccggacggcaagagcacgcgctcgcagagtacttcctgctccgactcgcagggctcg
tctctgtgctactcgcagccctccacctcctccggccaggaggacacacctgagctggag
cgcaccaccagctcaaacagcatcgagtcgtgccttcccgcgtcctgcctggaaccctgc
gtcatctgccagagcagacccaagaacggctgcatcgtccacggacgcaccggacacctc
atggcctgctacacctgcgccaagaagcttaaaaagcgcaacaagctgtgccccgtgtgc
agggagcccattcagtccgtcgtcctcacctacgtcagctga
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