KEGG   Ictalurus punctatus (channel catfish): 108279728
Entry
108279728         CDS       T04658                                 
Name
(RefSeq) E3 ubiquitin-protein ligase Mdm2
  KO
K06643  E3 ubiquitin-protein ligase Mdm2 [EC:2.3.2.27]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04068  FoxO signaling pathway
ipu04110  Cell cycle
ipu04115  p53 signaling pathway
ipu04120  Ubiquitin mediated proteolysis
ipu04144  Endocytosis
ipu04218  Cellular senescence
ipu04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108279728
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    108279728
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108279728
  09143 Cell growth and death
   04110 Cell cycle
    108279728
   04115 p53 signaling pathway
    108279728
   04218 Cellular senescence
    108279728
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    108279728
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108279728
   04121 Ubiquitin system [BR:ipu04121]
    108279728
Enzymes [BR:ipu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108279728
Membrane trafficking [BR:ipu04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    108279728
Ubiquitin system [BR:ipu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   MDM2/MDM4 proteins
    108279728
SSDB
Motif
Pfam: zf-C3HC4_3 SWIB zf-RING_2 Zn_ribbon_RanBP SWIB_eIF2D P22_portal
Other DBs
NCBI-GeneID: 108279728
NCBI-ProteinID: XP_017349640
Ensembl: ENSIPUG00000024445
UniProt: A0A2D0T493
LinkDB
Position
19:25740074..25749698
AA seq 473 aa
MATENCLSSSQINKIDNEKLVRPKVQLLTLLKDAGADKDVFTMKEVMFYLGKYIMSKELY
DKQQQHIVHCGNDALGTVLGVTSFSVKEPRALFAMISKNLIAVKIPDSQSTFRERRAVSE
AERGPEETNPQSSTSTQQQQQQQQQQQQQQQQQQRRRRRSSDPASLSAEDEPGEPRKRHK
SDSISLTFDDSLSWCVIGGLRRERQSSESSVSHSNSEVGISHSDESEECDDTDSDNFSVE
FEVESIDSDAYSENDEDSLPGEDEVYEVTIIAEDEDSFDEDTEITEEDYWKCAECEELNP
PLPRHCKSCWKVRPGWLPETFFTSENPGNDVQTDVNTDLEPKAPCAESPTPTLDPDEGVD
VPDGKSTRSQSTSCSDSQGSSLCYSQPSTSSGQEDTPELERTTSSNSIESCLPASCLEPC
VICQSRPKNGCIVHGRTGHLMACYTCAKKLKKRNKLCPVCREPIQSVVLTYVS
NT seq 1422 nt   +upstreamnt  +downstreamnt
atggctacggagaactgtctgagcagttcacagatcaacaagattgacaacgaaaagctg
gtaagacccaaagtgcagttgctaaccctgttaaaagatgcaggtgcggataaggacgtg
ttcaccatgaaggaggttatgttctacctgggcaagtacatcatgagcaaggagttgtat
gacaagcagcagcagcacatcgtgcactgtggaaacgacgccctcggcaccgtgctcgga
gtgaccagcttctccgtcaaagaaccacgagctttgtttgcaatgatttctaaaaatctc
atagcagtgaaaattccagactcccagtcgacgtttagagaacgtagagctgtaagtgaa
gctgagcgagggccagaggagacaaacccccaatcatctacctccacacaacagcagcag
cagcagcaacaacaacaacaacaacaacaacagcagcagcagcgcaggagacggcggagc
agtgatcccgcgagtctctcggccgaggacgaacccggcgagcctaggaagaggcacaag
tccgacagcatctccctgacgtttgacgacagcctgtcgtggtgcgtgatcggaggcctg
cgcagagagagacagagcagcgagtcttcagtatcgcacagcaattcggaagtaggtata
tctcacagtgacgagagtgaagaatgtgacgataccgactccgataacttcagcgtagag
ttcgaggtggagtctatcgattcggacgcttacagcgagaacgatgaagactccctaccc
ggcgaagacgaggtctatgaagttacaataattgccgaggacgaagactcttttgatgaa
gatacggagatcactgaggaggactattggaaatgtgccgagtgtgaagagctgaaccct
cccctccctcgccactgcaaaagctgctggaaggtccgcccgggatggctccccgagact
ttcttcacgtccgagaaccccggcaacgacgtgcaaaccgacgtcaacacggacctcgaa
cccaaagcaccgtgcgccgaatctccgactccgaccctcgacccggacgaaggcgtggac
gtcccggacggcaagagcacgcgctcgcagagtacttcctgctccgactcgcagggctcg
tctctgtgctactcgcagccctccacctcctccggccaggaggacacacctgagctggag
cgcaccaccagctcaaacagcatcgagtcgtgccttcccgcgtcctgcctggaaccctgc
gtcatctgccagagcagacccaagaacggctgcatcgtccacggacgcaccggacacctc
atggcctgctacacctgcgccaagaagcttaaaaagcgcaacaagctgtgccccgtgtgc
agggagcccattcagtccgtcgtcctcacctacgtcagctga

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