Ictalurus punctatus (channel catfish): 108280389
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Entry
108280389 CDS
T04658
Name
(RefSeq) tropomyosin alpha-4 chain isoform X3
KO
K09290
tropomyosin 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04260
Cardiac muscle contraction
ipu04261
Adrenergic signaling in cardiomyocytes
ipu04814
Motor proteins
ipu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108280389
04820 Cytoskeleton in muscle cells
108280389
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108280389
04261 Adrenergic signaling in cardiomyocytes
108280389
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108280389
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
108280389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
XhlA
CALCOCO1
TMF_DNA_bd
TMP_N
DUF3450
DUF16
DUF745
PUMA_CC
ERM_helical
Crescentin
HR1
KH_DEAH11_2nd
DUF1664
WS_DGAT_cat
CENP-F_leu_zip
EzrA
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
108280389
NCBI-ProteinID:
XP_017350797
Ensembl:
ENSIPUG00000003781
UniProt:
W5UML0
LinkDB
All DBs
Position
20:complement(3468199..3486359)
Genome browser
AA seq
248 aa
AA seq
DB search
MAGVNSVEAVKRKIKVLQQQADEAEERAEVLQRQVEEEKRSREQAEADVASLNRRIQLVE
EELDRAQERLTTALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEVQLKEAKHIAE
EADRKYEEVARKLVIIEGDLERTEERAEVAEAKSAELEEELRNVTNTLKSLEAQTEKYSQ
KEDKYEEEIKILTDKLKEAETRAEFGERSVTKLEKTIDDLEERLATAKEENLKIHATLDA
TLQDLNNF
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtgaacagtgtggaagcggtgaagcgcaagattaaagttctgcagcaacag
gcggatgaagccgaggagagagccgaggtcctgcagagacaggtcgaagaagaaaagcgc
tcaagggagcaggccgaagcggacgttgcttctctgaacaggcgcatccagctggttgaa
gaggagctggatcgagctcaggagagactcaccacagctttgcagaaactggaggaggca
gagaaggctgcagatgagagtgagaggggcatgaaggtgattgagaacagggccctgaag
gatgaggaaaagatggagctgcaggaggtccagctgaaggaggccaagcacattgcggag
gaagctgaccgcaaatacgaggaggtggctcgtaagcttgtcatcatcgagggtgatttg
gagcgcacagaggagcgagcagaagttgctgaggccaaaagtgcggaattggaggaggag
ctgagaaatgtcaccaataccttaaagtccttggaggcccaaactgagaagtattcccag
aaagaggacaagtacgaggaagagatcaagattctgacggataagctgaaggaggctgag
acccgcgccgagttcggcgaaagatcagtgaccaaactcgagaagacgattgatgatttg
gaagagaggctcgccaccgctaaagaggagaacctcaagatccacgccacgctggacgcc
actctgcaggatctcaacaacttctaa
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integrated database retrieval system
