Ictalurus punctatus (channel catfish): 108280452
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Entry
108280452 CDS
T04658
Symbol
nectin4b
Name
(RefSeq) nectin-4 isoform X1
KO
K06593
poliovirus receptor-related 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ipu04517
IgSF CAM signaling
ipu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
108280452 (nectin4b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108280452 (nectin4b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108280452 (nectin4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108280452 (nectin4b)
Cell adhesion molecules [BR:
ipu04515
]
Immunoglobulin superfamily
Nectin family
108280452 (nectin4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
V-set
Ig_2
ig
C2-set_2
SCY_4732_
TMEM154
Opalin
DUF7237
Tcell_CD4_C
LapA_dom
EphA2_TM
EzrA
Protocadherin
TMEM98_N
MLANA
PhoR
F59B103_C
Motif
Other DBs
NCBI-GeneID:
108280452
NCBI-ProteinID:
XP_017350903
Ensembl:
ENSIPUG00000018952
UniProt:
A0A2D0T7N4
LinkDB
All DBs
Position
20:19277872..19292795
Genome browser
AA seq
574 aa
AA seq
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MDEMKKMSNPACFALLLTAVIACVCGEFIQPPPSMALRAFAEDETRLPCEFKPQDGAKVI
QVTWSAEKAKGVKEQVITRHMTEGLQEFPSFAGRVRFTSSDPIKDSTLLILSTRESDQAT
YTCHITTFPSGNFDRQISLTVWRIPISTLEPVILEEGQSFRAAATCRAIGLPPPRLTWDT
DVPGQSQNRSSEDGVVTSQYSLHPLRNMNGRKLDCLVWHPALEHPRRLSNTLVVHFPPDA
MVSGYDQSWSVNQKGAELKCEGVGNPQPHNFTWTRKGGVLPKDVSVEGNRLVFTRPLNKT
DEGVYECEARNTVGSVKTEVNVKIPVTKPSQLEASFNNLLLIIVGGAAGALVVVMAIIIL
LVTCHHRRRTRKLKSELTEKKEEINNLSRQNSMRRLNSVSTDPRIQTEESTLIRMSSPIK
SSVFSLEENSIICEHRDGFREGEYDSLGRPAIYPSCHFERGSGRRKQTEVENQDHIQRVA
SYVKNYSMTLDAELCRDQSPPPLSISSGGSRERGTGNDVWGQREGMPEGEEGDCTSDSHQ
ISEAISNYFHYSNGVLQPKPHPNAILLHKRGQII
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgaagaaaatgtcaaacccagcctgctttgccctgttactgaccgcagta
attgcctgtgtgtgtggcgagtttattcaaccccctccgtccatggcactgcgtgccttc
gctgaggatgagacccgactgccgtgtgagtttaaaccacaggacggtgccaaagtgata
caggtgacctggtctgcagaaaaggccaagggtgtcaaggagcaggtcatcaccagacac
atgacagagggacttcaagagtttcctagcttcgcaggccgtgtgcgcttcacaagttct
gatccaattaaagactcaacgctgttgattctgagcacaagggagtcggatcaagccacg
tacacctgccacatcaccacttttccttcagggaactttgacagacaaatcagcctcact
gtctggaggattcccatctccacactggaaccggtcatcctggaggagggtcagtcattc
cgagcggctgccacctgccgtgcgattggtctccctccaccacgtcttacctgggacacc
gatgtgcccggccaatcacagaacaggagctcagaggacggggtagtcacctcccagtac
tcgctgcaccctctgcgcaacatgaatggccgcaaactggactgcctggtgtggcaccct
gctctagagcacccccgcaggctgagcaacacactggtcgtgcactttcctcctgatgct
atggtttctggttacgatcagagctggtcagtcaatcagaagggagctgagctcaagtgc
gagggtgtaggaaatcctcaaccacacaacttcacctggaccaggaagggtggggttttg
cccaaggacgtatctgtggaggggaacaggctcgttttcactcgtcccctaaataaaact
gatgaaggagtgtatgaatgtgaggccagaaacacagtgggatcggtgaagacagaagtt
aatgtcaagatcccagtgaccaaaccttcccagctcgaggcctctttcaacaacctcctc
cttatcatagtgggtggagctgctggggctttagtagtcgtcatggcgattatcatcctt
ctggttacctgccaccatagacgcaggaccaggaaacttaaaagtgagctcacagagaag
aaggaagagatcaataatctttcaagacagaactctatgaggagacttaactcagtcagt
actgaccccaggatacagactgaagaatccaccctaatcaggatgagctctcctataaaa
agcagtgtcttttcactagaggagaattccatcatatgtgagcacagagatgggttcaga
gaaggagaatacgacagcctcggccgtccagccatctacccgtcttgccacttcgagcga
gggagcgggaggaggaaacagacagaggtggagaatcaagaccacattcaaagagtggca
tcctatgtaaagaactatagtatgactttggatgcagaactttgcagggaccagagccct
ccacccttgtccattagctcagggggttcaagagaaagagggacgggaaacgacgtatgg
ggacagagagaaggcatgccagagggagaggagggagattgtacctcagactcgcatcag
atttcagaggcaatctcaaactacttccactacagcaacggtgtcctccagccaaaaccc
cacccaaacgctatactactgcacaaacgtggtcagatcatataa
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integrated database retrieval system
