Ictalurus punctatus (channel catfish): 108280750
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Entry
108280750 CDS
T04658
Symbol
tgfb1a
Name
(RefSeq) transforming growth factor, beta 1a
KO
K13375
transforming growth factor beta-1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04060
Cytokine-cytokine receptor interaction
ipu04068
FoxO signaling pathway
ipu04110
Cell cycle
ipu04148
Efferocytosis
ipu04218
Cellular senescence
ipu04350
TGF-beta signaling pathway
ipu04518
Integrin signaling
ipu04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108280750 (tgfb1a)
04350 TGF-beta signaling pathway
108280750 (tgfb1a)
04068 FoxO signaling pathway
108280750 (tgfb1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108280750 (tgfb1a)
04518 Integrin signaling
108280750 (tgfb1a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108280750 (tgfb1a)
09143 Cell growth and death
04110 Cell cycle
108280750 (tgfb1a)
04218 Cellular senescence
108280750 (tgfb1a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
108280750 (tgfb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ipu03110
]
108280750 (tgfb1a)
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ipu04052
]
108280750 (tgfb1a)
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108280750 (tgfb1a)
Chaperones and folding catalysts [BR:
ipu03110
]
Intramolecular chaperones
Others
108280750 (tgfb1a)
Cytokines and neuropeptides [BR:
ipu04052
]
Cytokines
Transforming growth factors (RSTK binding)
108280750 (tgfb1a)
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Growth factors/receptors
108280750 (tgfb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
RYDR_Jsol
Motif
Other DBs
NCBI-GeneID:
108280750
NCBI-ProteinID:
XP_017351607
Ensembl:
ENSIPUG00000006804
UniProt:
W5UJT3
LinkDB
All DBs
Position
20:complement(6193389..6218533)
Genome browser
AA seq
381 aa
AA seq
DB search
MRQLCLALAVVCLASVAGAMSTCKTLDLEVAKRKRIEAIRGQILSKLRMAMEPESEEDDQ
EQSIPDNIISLYNSTVETTTDQESKLVPASQYQEEEEYFGKEMHKFDMTHWTPENFTEHK
QLFFNVGEMKKSIQDYRQLSQAMLRLRVKDTTIQSSMWQRLEIYKGLGSAAKYLGFYDIN
NDLLNKWISVDVTATLKEWLQSSTNEQGFELRLHCGCGDPVENFKFTISGLNTVRGDKTF
IAGLMPKPYILAMSMSVPAEGHSTQRKKRSPATEPTCDEKTEACCMRKLYIDFRKDLGWK
WIHKPKGYYANYCMGSCAYIWNAENKYSQILALYKHHNPGASAQPCCVPQLLEPLPIMYY
VGRQYKVEQLSNMVVKSCKCS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaactttgtttggcattagccgttgtttgcttggcatctgtagctggtgccatg
tccacctgcaagactctggacctagaggtggcgaagaggaagcgaatcgaagccattcgt
ggacagatcctcagtaagttgcgcatggccatggagcccgagtctgaagaggatgaccaa
gaacagagcatcccagacaatatcatctcgctctacaacagcacagtggagaccaccaca
gaccaggagagcaagctagttcctgcctcacagtaccaggaagaagaggagtactttggc
aaagagatgcacaaattcgacatgactcactggacaccagagaacttcacagagcataaa
cagctgttctttaatgtgggggaaatgaagaagagcatccaggactacaggcagctgtca
caggccatgctcaggctgcgagtgaaagatactacaatccaaagcagtatgtggcagaga
ctggagatctacaaaggtctgggcagtgcagcaaaatacctgggcttttatgatatcaat
aatgatttgctaaacaaatggatatccgtcgatgtaacagctacgctcaaagagtggctc
cagtcttccacaaatgaacaaggatttgagctgaggctgcactgtggatgtggggatcct
gtggagaacttcaaatttaccatatcaggtttgaatacagtgagaggagacaaaactttt
attgctggcttaatgcccaagccgtacattctggccatgtccatgtctgttcctgctgag
ggccatagcactcaacgcaagaagcgatcccctgccacggaaccaacttgtgatgaaaaa
acagaagcatgctgcatgcggaaactctacatcgatttccggaaggatctcggctggaag
tggatccacaagcctaaaggatattatgccaactactgcatgggctcctgcgcctacatc
tggaacgctgagaacaaatactcacagattttagccctttataagcaccataaccccggt
gcttcggctcaaccttgctgtgtacctcaactcctcgaacctcttccaatcatgtattat
gtgggcagacaatacaaggtggagcagctgtccaacatggtcgtgaaaagctgcaagtgc
agttaa
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