Ignavigranum ruoffiae: M0R79_06540
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Entry
M0R79_06540 CDS
T08083
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
iru
Ignavigranum ruoffiae
Pathway
iru00300
Lysine biosynthesis
iru00550
Peptidoglycan biosynthesis
iru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
iru00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M0R79_06540
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
M0R79_06540
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
iru01011
]
M0R79_06540
Enzymes [BR:
iru01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
M0R79_06540
Peptidoglycan biosynthesis and degradation proteins [BR:
iru01011
]
Precursor biosynthesis
Amino acid ligase
M0R79_06540
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF6305
Motif
Other DBs
NCBI-ProteinID:
UPQ85309
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Position
complement(1230531..1232027)
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AA seq
498 aa
AA seq
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MNQVNLLSVMNNKEIYGKSPSHETVTALVNDHRQIVPGACFIAIKGQNFDGHSVLGKAVQ
SGAKILIVEELPMPLISEDVVWVQVPSTYRAQAILANHFFEEPSTKLDLVAVTGTNGKTT
TTTMISELLTNLGHRTGLIGTLHYKVDQTYYPAINTTPDALKLQSLFKEMVDHDCDDAII
EASSHALALGRIWYTDVNCAIFTNISREHLDFHKTMDHYAYAKSLLFAHLGEHFEKGQAK
LAVINADDAYADLMMQASGAEIATYSLKDPSATAYAHSIESLEDGIRFVLDFKGQSHSIQ
LPMLGSYNVANYMAAFLCLALYYHFSVEDILQATEDFTGVRGRMQMIDEGQDFQVIVDFA
HTPDALENVLTDLNQHKRGRLITMMGHSGGNRDSGMRPDLGDILFKYSDWVVLTADNPRH
ENVTKICQEMRQNHDEIPYTIIEDRQEAIAYILDQVEANDTVLFAGKGGEPYQVIGDEYV
PFDEIEIVRQLLHNRGNE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagtcaatttattatcagtgatgaataacaaagaaatttacggcaaaagtcct
agtcatgaaacagttaccgcattggtaaatgatcaccgtcagattgtgccaggagcttgt
tttattgcgattaaaggccaaaatttcgatggtcacagtgttcttggtaaagccgttcaa
tccggagcaaagattctgattgttgaagaacttccaatgcccctaatttcagaagatgtt
gtctgggtccaagtaccatcaacctaccgggctcaagcgattctggcgaatcatttcttt
gaagaaccctcaacaaaattagatttggtggcagtcactggaaccaatggtaagaccacc
acgacgacgatgattagtgaattgttaacgaatctcggtcatcggacaggtttaattgga
accttgcattataaagttgaccaaacatactatccagccattaatacgacgccagacgcc
ttaaagctacagtcattatttaaagaaatggttgatcatgactgcgatgatgctattatt
gaggcatcttcccatgccttagctttgggacgaatttggtatactgatgtgaattgtgcc
atctttaccaatattagccgggaacatttagattttcataagaccatggaccattatgcc
tatgcaaaaagtttattgtttgctcatttaggtgaacactttgagaagggacaagccaaa
ctagcagtaattaatgccgatgatgcttatgctgatttgatgatgcaagccagtggcgct
gaaatagctacttatagtcttaaagacccatcggctacggcctatgctcattcaattgag
tctttagaggatggaattcgttttgtgttagactttaaggggcaaagtcattcgattcaa
ttaccgatgttagggagttataatgtggctaattatatggctgctttcttatgtttggcc
ttatattatcatttctctgtagaggatattctccaagctacggaagacttcactggggtt
cgcggacgtatgcagatgattgatgaaggtcaagatttccaggtcatcgttgatttcgct
catacacctgatgccttggaaaatgttctgaccgatttaaatcaacataaacggggtcga
ttaattaccatgatgggccactcaggggggaatcgcgattcaggaatgcgcccagatctg
ggggatattttatttaaatattctgattgggttgtattaactgcagataaccctcgccat
gagaatgttacaaaaatttgtcaagaaatgcgccaaaatcatgacgaaataccttatacc
attatagaggatcgtcaagaagccattgcctacattctcgatcaggttgaagcgaatgat
accgttctgtttgctggtaagggtggcgaaccttatcaagtcataggcgatgaatatgtg
ccattcgatgaaattgagattgttcgtcaattattgcataatagggggaacgaataa
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