Ixodes scapularis (black-legged tick): 115308616
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Entry
115308616 CDS
T01131
Name
(RefSeq) uncharacterized protein LOC115308616
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc04120
Ubiquitin mediated proteolysis
isc04140
Autophagy - animal
isc04144
Endocytosis
isc04517
IgSF CAM signaling
isc04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115308616
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115308616
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115308616
04140 Autophagy - animal
115308616
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115308616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
isc04131
]
115308616
04121 Ubiquitin system [BR:
isc04121
]
115308616
Enzymes [BR:
isc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115308616
Membrane trafficking [BR:
isc04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
115308616
Ubiquitin system [BR:
isc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
115308616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-C3HC4_3
MATH_2
zf-C3HC4
zf-C3HC4_2
zf-RING_5
Prok-RING_4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
115308616
NCBI-ProteinID:
XP_040071079
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MLGGTTYCVSGFGKGLDMRPMNFKDTIQKIRVCSLCSVIPSTVVLLPCSHSVCELCFDKC
LEDGERCLLDQERLGQECLEKLTLSEEKLATWQVACWNTPYGCTFSGSSIALLDHFEKHC
KFHAVCCSRCDHYVLRSDVVGHLKSGCSALLTEDGPGSSSNRRGGTSVGDGGKAMGEMKN
AVEKMADEQLHLQSSLNGLLESAKYQTAEITKVLELVDEVRCSVLIGLEMTKANCKEQIL
RLGDNLSSQTMDIARSVRQLRPRIIHWYLEGWEKIKEAVLGKPVVYTESGVQTLYGYAVS
QNIEIRKQNEELRLDCHLRIHASQNDDDLEWPFKYDCHVGIIHPRRHSKMFCTVNAGTPE
HREVFKRPVGVRNTGLGSFLATVNSIESQGFIQNDTLHLFVEIVP
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgttaggcggaactacgtactgcgtttctggatttggaaagggcctcgacatgaggccc
atgaatttcaaggacacgattcagaagatccgagtgtgcagcctgtgcagcgttattccc
agcaccgtggttctgcttccgtgctcgcactcggtctgtgagctgtgcttcgacaagtgt
ctcgaagacggggaacgctgtctgctcgaccaagaacggctgggacaggaatgcttagag
aagctgacgctttcggaagaaaaacttgcgacatggcaggtggcttgctggaatacgcca
tacggttgcacattctcgggttcgagcatcgctctcctggatcactttgagaagcactgc
aaattccacgcggtctgctgctctcgctgcgaccactacgtgcttcgcagcgacgtggtg
ggacacctcaagtcgggatgcagtgcactcctgaccgaagacggaccagggtcatcctct
aacaggcgcggcggtacatccgtcggtgacgggggaaaggcgatgggtgaaatgaaaaac
gccgttgagaaaatggcagacgagcagcttcacctccagagtagcttgaacggcctcctg
gagagtgctaaataccaaacagctgagatcaccaaagtccttgaactcgtcgatgaagtt
cggtgttcggttcttatcggtctcgaaatgaccaaagctaattgtaaagagcaaatactc
cgactgggggataacctgtcatcgcagacgatggacattgcgcgtagtgtgcgtcagctg
agacccagaattattcactggtacctcgaagggtgggaaaaaataaaagaagcagtgctg
gggaagccagtcgtctacacggagagtggagtgcaaacgttgtacggatacgcagtctct
caaaacattgagataaggaagcagaacgaggaactgagattagattgccacctgagaatt
cacgcgagtcagaacgacgatgaccttgagtggccctttaagtacgactgtcacgtgggt
atcattcacccgagacgtcactctaaaatgttctgcacagttaacgctggcacaccggaa
caccgagaggtcttcaaaagacccgtgggagtgcgaaacacgggcttggggtccttcctg
gcaaccgtgaattcgatcgaaagtcaaggatttattcaaaacgatacactccacttgttt
gtggaaattgtaccgtga
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integrated database retrieval system
