Ixodes scapularis (black-legged tick): 120841470
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Entry
120841470 CDS
T01131
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc03018
RNA degradation
isc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120841470
09123 Folding, sorting and degradation
03018 RNA degradation
120841470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
isc03019
]
120841470
03041 Spliceosome [BR:
isc03041
]
120841470
Messenger RNA biogenesis [BR:
isc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120841470
mRNA degradation factors
5'-3' decay
Lsm complex
120841470
Spliceosome [BR:
isc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
120841470
Complex C
U2 snRNP components
120841470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
DUF150_C
Glutaredoxin
Motif
Other DBs
NCBI-GeneID:
120841470
NCBI-ProteinID:
XP_040068301
LinkDB
All DBs
Position
Unknown
AA seq
102 aa
AA seq
DB search
MADDGEQAPTTAVEEPLDLVRLSLDEKIYVKMRNERELRGRLHAYDQHLNMILGDVEETV
TSVEIDEETYEEVYKSTKRSIPMLFVRGDGVILVSPPVRGTN
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacggcgaacaagcaccgacgacggctgtggaggagccgctcgacctggtc
aggctgagtttggacgagaagatctacgtgaaaatgcgcaacgagcgcgaacttcgagga
aggttgcacgcgtacgaccaacatctcaacatgatcttgggggacgttgaggaaaccgtg
actagcgttgagattgatgaagagacgtacgaggaagtctataagagtaccaagaggtcc
atcccgatgctctttgttcggggagatggtgtcatcctcgtgtcccctccggttcgaggc
acaaactag
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