KEGG   Ixodes scapularis (black-legged tick): 8030470
Entry
8030470           CDS       T01131                                 
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
isc  Ixodes scapularis (black-legged tick)
Pathway
isc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:isc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8030470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:isc03019]
    8030470
   03041 Spliceosome [BR:isc03041]
    8030470
   03032 DNA replication proteins [BR:isc03032]
    8030470
Messenger RNA biogenesis [BR:isc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     8030470
Spliceosome [BR:isc03041]
 Complex A
  U1 snRNP components
   Sm proteins
    8030470
  U2 snRNP components
    8030470
 Complex B
  U1 snRNP components
    8030470
  U4/U6.U5 tri-snRNP components
    8030470
 Complex C
  U2 snRNP components
    8030470
DNA replication proteins [BR:isc03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     8030470
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 8030470
NCBI-ProteinID: XP_029844061
LinkDB
Position
Unknown
AA seq 238 aa
MTISKNNKMLQHINYRMRVILQDSRIFIGTFKAFDKHMNLILGDCEEFRKVKGKNQAKQG
DREEKRVLGLVLLRGENIVSLTVEGPPPPEEGLPRVPIPGATPGPGIGRAAGRGVPAAPV
GAAPAGLQGPVRGVGGPSPQVMAPQGRGGPMPPGVGVAAPPQVRPGGPPPPGAMGMRGPP
PPGMMGGPPGMMGRGMPPPGAMPMGGRPPMGPPGMRGPPPPGMMRGGPPPGMRPPPRG
NT seq 717 nt   +upstreamnt  +downstreamnt
atgacgatcagtaagaacaacaagatgctgcagcacataaactaccggatgcgagtgatc
ctgcaggacagtcgcattttcatcggaacattcaaagcgttcgacaaacacatgaacctc
atccttggagattgcgaggagttccgcaaggtaaagggcaaaaaccaggcgaaacaaggc
gatcgcgaggaaaagagagtcctcggtctggttcttcttcgtggggaaaacatcgtgtcg
ctgaccgtggaagggcccccaccacccgaggagggcctgccgagggtgcccatccctggg
gcgacgccaggcccgggtattggacgcgccgcaggcaggggtgtgcctgcagctccagtt
ggtgctgcgccggcaggcctccagggccccgtgcgtggcgtgggtggcccgtctccgcag
gtgatggctccccagggtcgcggcgggcccatgccgcccggcgtcggggtggctgcgccg
ccccaggtgcgtcccggcgggcccccgcccccgggcgcgatgggcatgagggggcccccg
ccgccagggatgatgggcggtccccccggcatgatgggccgtggcatgcccccacccggg
gccatgcccatgggcggccggccacccatggggccgccgggcatgcggggcccaccccct
cccggcatgatgcgcggaggtccgccccctggaatgagaccgcccccacggggttga

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