KEGG   Ixodes scapularis (black-legged tick): 8053876
Entry
8053876           CDS       T01131                                 
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
isc  Ixodes scapularis (black-legged tick)
Pathway
isc03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:isc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    8053876
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:isc03000]
    8053876
   04121 Ubiquitin system [BR:isc04121]
    8053876
   03036 Chromosome and associated proteins [BR:isc03036]
    8053876
Enzymes [BR:isc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     8053876
Transcription factors [BR:isc03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    8053876
Ubiquitin system [BR:isc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     8053876
Chromosome and associated proteins [BR:isc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    8053876
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     8053876
SSDB
Motif
Pfam: PHD_4 zf-CXXC LRR_6 F-box-like JmjC Cupin_8 JHD F-box Cupin_1 JmjC_2 LRR_Zer-1
Other DBs
NCBI-GeneID: 8053876
NCBI-ProteinID: XP_029823948
LinkDB
Position
Unknown
AA seq 1211 aa
MADSDVNSETDPSASISHSSKRVKERRHYTEDCLQDDEIEGRRMFTVEDKVTSPAFTCTF
VKEMKGEDFSLKYFQENGFEYPMLFKSKANMGMRLPSHNFTCNDVRQCVGSRRILDVMDV
TTQKDIEMTMKDWCRYFENPNRDKLLNVISLEFSHTKLENYVESPSVVRQVDWVDVVWPR
HLKELQTEGTNAIEDMRYPKVQKYCLMSVKGCYTDFHIDFGGTSVWYHLLRGQKVFWLIP
PTKRNFQLYEQWVLSGKQGDVFFGETVEKCDRVTLNEGDTFFIPTGWIHAVYTPVDALVF
GGNFLHSYGIEKQLQIAQIEDATHVPLKFRYPFYREMLWYVLQRYVQCLLGINHLTCNED
GDPVEAPRRGAAGSRPSPAGGPFSAGAPLGSQGAPGDGSSFLDLSTLSPKPLTNGNPGSS
PTMQAEDSMDSADEPGRRTYAPGHVHLTRREIDGIRMIIRWLQKLPANKKFVPDLVRDPD
ALLADAKRLVKEHKHDDPLLAVTDKPVLFWPESKKKSKPRVGGPPSGKHSSKGGGRGSDK
DKNGARRRRTRCKKCEACLRADCGDCHFCKDMKKFGGPGRMKQSCISRQCMAPVLPHTAC
CMLCGRDGWEKGAPPQPCDQEACSSLMECSQCWEIVHPACLHERHPALRGAQGCVSDDLP
NSWECPKCCRDGKPDQVKPRHTRGRVSKGPHDGRPDSECTPCGDATGGSSPVARGNPALN
LTLRPHEAAAAAAELSSSELDVCGAPAKKKIKTEGPQEPLEYDGMPLSDDPVQQVQPAAS
NGDISDEDMCKDNVGLDASALNRPRKDDYVRSCSRLTVAVPDKKPVIVKSSHDQIVQSMR
GLHKGSEPEAAEAAALPLSVPPGGEFVSRTDSPDSNKEDRNPTANGGAPPEYILSGASHP
GDFKLKMTLRDRGNLRKPRYVVRPAPLPEDLEKAKMPPAVQLPADAKGPCYALLREAMLP
VLRYLTPRELSQCQLVCKAWNRWCVEPGMWRRVDLSRRRVTAHALAGIVRRQPTCLDLAW
TNVSAKQLSWLLPRLPHLRELGLSGCSAAAVVAALRSGVCPGLRCLDLSWVEGLGDQAVR
DLVAPDARSKPRLLVEVRLAGCDISDVAVRLLGHQLPQLSRLDLSDCRGVTDMGIAVLGA
AKASRLTALDVSRCANVSDTGLEALRRCSGLRHLDLRDCPQVTDSACRRFVAQSRLPVEL
KESKLIELVQA
NT seq 3636 nt   +upstreamnt  +downstreamnt
atggcggattccgacgtgaatagcgagacagacccttcggcgtcgatttcgcattcgtcg
aagcgagtgaaggagcgtcgtcactacacggaagactgtcttcaggacgacgaaatcgaa
gggcgaaggatgtttaccgtggaggataaagtcaccagccccgctttcacctgcaccttc
gttaaagagatgaagggggaagatttttctctgaagtacttccaagagaatggatttgag
taccctatgctgttcaagagcaaggcaaacatgggaatgaggttaccaagccacaatttt
acatgtaatgacgtccggcaatgtgtcgggagccgcaggatcctggacgtgatggacgtg
accacccagaaggacattgagatgacgatgaaagactggtgtcgttactttgaaaacccc
aaccgtgacaagctcctcaacgtcatcagcctcgagttcagccacaccaagctggagaat
tatgtcgagtcgccaagcgtggtccgccaggtggactgggtggacgtggtgtggccgagg
cacctgaaggagctccagacggagggcaccaacgccatcgaggacatgagataccccaag
gtccagaagtactgtctgatgagtgtaaaaggctgctacacagacttccacatcgacttt
ggaggaacatctgtctggtaccatctgctgcgtgggcaaaaagtgttctggctgatccct
cccaccaagcgcaacttccagctgtacgaacagtgggtgctctctggcaagcagggggac
gtcttcttcggggagaccgtggagaagtgcgaccgcgtcacactcaacgagggcgacacc
ttcttcatacccacgggctggatccatgccgtctatacacctgtagacgcgcttgtgttt
gggggtaactttctgcacagctacggcatcgagaaacagctccagattgcccagatagaa
gatgccacacacgtgcccttgaagttccgctacccattctaccgggagatgctgtggtac
gtgctgcagcgctatgtccagtgcctgctgggcatcaaccacctgacatgcaatgaggat
ggggaccccgtggaggcgcctcgacgcggtgccgccgggtcccggccgtctcctgcaggg
gggccgttctcggccggtgctccattgggcagccagggcgcaccgggtgacggcagctcg
ttcctggacttgagcacgctgtcgcccaagcccctgaccaacggcaaccccggctcgagt
cccaccatgcaggccgaagactccatggactcggccgatgagccgggcaggcgcacctac
gcgccaggccacgtgcacctgacacgcagggagatagatgggatccggatgattatccgg
tggctgcaaaagcttcccgccaacaaaaagtttgttccagaccttgtccgagacccggac
gccctgttggctgacgccaaacgcctggtgaaggagcacaagcacgacgacccactgctt
gcagtcaccgacaagccggtccttttctggccagagagcaagaaaaagagcaagccccgg
gtgggcggacccccgtcgggcaagcactcgtccaaggggggcggccggggctcggacaag
gacaagaacggggcgaggcgtcggcgcacgcgctgcaagaagtgcgaggcctgcctgcgt
gccgactgcggggactgccacttctgcaaggacatgaagaagtttggcggccccgggcgc
atgaagcagtcctgcatcagccgacagtgcatggccccggtgctgccccacacggcgtgc
tgcatgctatgcggccgggacggctgggagaagggtgcgcccccgcagccctgcgaccag
gaggcctgctcctcactcatggagtgctcccagtgctgggagattgtgcatccggcctgc
ctgcacgagcgccaccccgccctccggggcgcccagggttgcgtcagcgacgacctgccc
aacagctgggagtgccccaaatgctgccgcgacggcaagcccgaccaggtcaagccacga
cacactcgagggagggtgtcgaaaggtccacatgacggccggccagactcagagtgcact
ccatgcggtgatgctaccggcgggagctcccccgtggcgcgcggcaacccggcgctcaac
ctcactctgcggccccacgaagcagctgccgccgccgcagaactcagctcctccgagctg
gacgtctgcggcgcgccagccaagaagaagatcaagacagaaggacctcaggaacccctc
gagtacgacggcatgcctttgtcagacgacccggttcagcaagtacagcctgccgccagc
aatggagacatcagtgacgaggacatgtgcaaggacaacgttggccttgacgcatccgca
ttgaaccgaccccggaaggacgactacgtgcgctcgtgctcccggctcacggtggctgta
ccggacaagaagcccgttattgtcaagagctcgcacgaccagatcgtccagtccatgcgc
ggcctgcacaaaggctcggagccggaggcggccgaggccgccgcccttcccctctccgtc
ccgccagggggagagtttgtgtcccggacagacagcccggactcgaacaaggaggaccgg
aaccccactgccaatggcggtgcacccccggagtacatcctgagcggcgcctcgcaccct
ggcgacttcaagctcaagatgactctacgagacaggggcaacctgaggaagccccgctac
gtagtccgccctgcgcctctgcccgaggacctggagaaggccaagatgccgccggccgtc
caattaccggcggacgccaagggcccctgctacgcgctgctgcgagaggccatgctgcct
gtcctgcgctacctgacgccccgcgagctctcgcagtgccagctggtgtgcaaggcctgg
aaccgctggtgcgtggagcccggcatgtggcggcgggtggacctgtcgcggcgccgggtg
actgctcacgcgctggcgggcatcgtacggcgccagcccacttgcctggacctggcctgg
accaacgtgtcggccaaacagctcagctggctgctgccccggctgccccacctcagggag
ctcgggctgagcggctgctcggcggcggcggtggtggccgccctgcggtcgggcgtctgc
ccggggcttcgctgcctggacctcagctgggtcgagggcctgggggaccaggccgtgagg
gacctcgtggcccccgacgcccgttccaagccccgcctgctcgtggaggtgcgcctggct
ggctgcgacatctccgacgtggccgtgcgtctgctcggccaccagctgccccagctgagt
cgcctcgacctgtcggactgccgtggagtcacggacatgggcatcgcggtgctcggggcg
gccaaggcctcgcgcctcacggcgttggatgtgtcgcgctgcgccaacgtgtcggacacc
ggattggaagcactccggcgctgttccgggctgcgccacctggacctccgcgactgcccg
caagtgacagactcggcatgccgccgctttgtcgcgcagagtcgcctgcccgtcgagctc
aaggagagcaagttgatagagctggtgcaagcctga

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