Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101954285
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Entry
101954285 CDS
T10664
Symbol
Nlrp1
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101954285 (Nlrp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101954285 (Nlrp1)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
iti04054
]
101954285 (Nlrp1)
Membrane trafficking [BR:
iti04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
101954285 (Nlrp1)
Pattern recognition receptors [BR:
iti04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
101954285 (Nlrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
PYRIN
NOD2_WH
LRR_6
AAA_16
NPHP3_N
NB-ARC
nSTAND3
AAA_22
Zeta_toxin
AAA_33
AAA
AAA_14
AAA_5
VapE-like_dom
AAA_30
Motif
Other DBs
NCBI-GeneID:
101954285
NCBI-ProteinID:
XP_021590293
LinkDB
All DBs
Position
Unknown
AA seq
1417 aa
AA seq
DB search
MNIPKALLPGAEMARGTQDQLAHYLELLPKEELKEFQLRLSNKTLFGCPSGVTPAQPEKA
SGTEVASQLVAQYGEQRAWDLAFHTWEQMGLSLLCAQAQAQTTLTSSNSSLIIGSPKTPA
MESPSWPTSTEVLKFWNFPCTGSTRESKRIFPVTPSHIQKGNPPLFLHRAPSSSTDQESP
SQESPNAPTSTVLGGWEPPSQTNAEPRHQGAPDTEKLLAETSGNYYGGIRERYQNQRREK
LRHAQSWKNDNMHQKFTQLLLLQKPHSRGKNPLARKSWHRNAVEEQGHLIEIRELFGPGP
GFQKEPHIVILHGAPGIGKSTLARQVKGAWEEGQLYRDRFQHVFYFSCRELAQCKLVSLA
ELISEDGTAPTAPIRQILSQPEQLLFILDGIDEPKWVLENQSPELCVHWSQSQPVHALLG
GLLGKAILPEASLLLTSRTTDLQKLIPSLKQPRWVEVLGFSESGRKEYFYKYFTDESQAN
RAFTMLKSNPELLTLCLMPLVSWMVCTYLKENMKLGKVLPPTIQTLTSLYMHYLFQAFPA
PHLGTQLKDFCSLAAEGLWQRKTVFSAGDLRKHELNEAIITIFLKRGVLRKGPDSLTYSF
IHLCFQEFFAAMSYALRDKEERSQSPDGLGGMEELLDVYGRNNLFGAPTVRFLFGLLSDH
WSRATEEPFTFQLYPERKWELLQWVEAKSPPGKPHSLEFLHCLYETQDEEFLMQAMDCFQ
RTRMYVQTDMELLVFIFCIKFCGHVKRLQLNESPQKGQGWRPPGVVLSRWVPITDNSWQV
LFSTLRVSGGLRELDLSGNSLSHSAVQNLRRTLRPPLCYLETLRLASCGLTAESCKDLAI
GLSTSETLTELELNFNLLTDSGAQHLFQSLSQRYCKLQRLRLVSCGLTSSCCQDLASALS
VSPRLLELDLQQNDLGDHGVRLLYKGLKHPACQLTLLWLDYIPLSDQVREELKALEEEIP
RLLISSRWKPSVMIPTGDPDEGQMGENMSSLKRQRPQSEESSPQVAQVEPFHLSSHASAE
DLHMEPLGTEDNFWGPTGPVATEMVDKEKSLYRVHFPMAGSYCWSNTGLTFVVRRAVTIE
IEFCAWDQFLGNTIPPQSWMVAGPLFDIKAEQGAVAAVYLPHFVALQEGPVDISLFHVAH
FKEEGMLLEKPSRVEPHYAVLEDPSFSPMGILLRMIPTALCFIPITSTTLLYHQLHPKEI
TSFHLYLIPSDCSIQKAIDDEEKKFQFVRIHKPPPVTPLYLGSRYTVSASRKLEIIPKEL
ELCYRSPREPQLFSEFYIGHLGSGIRLQIKNKKGGTVVWKAQLKPGDLRPAATPIPPVTK
DALGSLHFVDRHREQLVARVTSVDPVLDKLHGQVLSEEQYEKVRAETTKPGQMRKLFSFS
RSWDWACKDQLYRALKEIHPHLIVELWEKWGGDLGSL
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgaatatccccaaggctctcctgcctggggcagagatggccagagggacccaggaccag
ctggctcattacctggagctactgccgaaagaggagctgaaggaattccagcttcggcta
tccaacaaaacactctttgggtgtccttctggtgtgacaccagctcaaccagagaaggca
agtggtacggaggtggcctcacaactggtggctcagtatggggagcagcgagcctgggac
ctggccttccatacctgggaacagatgggcctgagtctgctgtgtgcccaggcccaggca
cagacgaccttgacttcaagcaactcttccttaatcatcggctccccaaaaacacccgcc
atggagtcccccagctggcccacctccacagaagtgctgaagttctggaattttccttgc
accgggtccacccgggaatcaaagagaatttttcctgtaacacctagccacatccagaaa
ggaaatcctcccttgttcctccaccgagctccttcaagctctacagaccaggagtctcca
agccaagagtcacccaatgcccccacatccacagtgctggggggctgggaacctccatct
caaaccaatgcagaaccaaggcatcagggagctcctgatactgagaagcttctggctgaa
acatctggaaactattacggaggaatcagagaaagatatcaaaaccagagaagagaaaag
ctccgccacgcacaatcctggaaaaatgacaatatgcaccaaaaattcacacagctgcta
cttctacaaaaacctcattccagaggcaagaatcccctggccaggaaaagctggcatcgt
aatgcagtggaggagcaaggacatttaattgagatccgtgaattatttggcccaggccca
ggtttccagaaagaacctcatattgtcatactgcatggggctcctggaattggaaagtca
acactggccaggcaggtgaagggagcctgggaagaaggccagctgtacagagaccgcttc
cagcacgtcttctacttcagctgcagagagctggcccagtgcaagttggtgagtctggct
gagctcatctcagaagatgggacagcccctacagcgcccatcaggcagatcctgtctcag
ccagagcaattgctcttcatcctggatggtatcgatgagccaaaatgggtcttggagaat
cagagtcctgagctctgtgtgcactggagccagtcacagcctgtgcatgcactcctgggc
ggtttgctggggaaagccatactccctgaggcctccttgctgctcacatctcggaccaca
gatctgcagaaactcattccttctttgaagcaaccacgttgggtagaagtcctgggcttc
tcggagtctggcaggaaagaatatttctacaaatatttcacagatgaaagccaagcaaac
agagcctttactatgctgaaatcaaaccctgagctcttgacgttgtgtctcatgcccttg
gtgtcctggatggtctgcacttacctgaaggagaacatgaagttggggaaagtactccca
cccaccattcagaccctcacaagcctgtatatgcactaccttttccaggcctttccagct
ccacacctagggacacagctcaaggacttctgttctttggctgctgaaggcctctggcaa
agaaagactgtgttcagtgcaggtgacctcaggaagcacgagttaaatgaagccatcatc
accattttcttgaagaggggtgttctccgcaagggccctgactccctgacctatagcttc
attcatctctgtttccaggagttctttgcagcaatgtcctatgccttgagggataaggag
gaaagaagccaaagtcctgatggccttggaggtatggaagagctgctagatgtgtatgga
aggaacaacctctttggggcaccaaccgtgcgcttcctgttcggcctcttaagtgatcac
tggtcaagagcaacggaggaacccttcaccttccagttgtatccggaaaggaaatgggag
ctgctgcaatgggtggaggccaaatccccaccaggaaagccacactctctggagtttctc
cattgtttgtatgagactcaggatgaggaattcctaatgcaggccatggactgtttccaa
agaacaaggatgtatgtccagacagacatggagcttctggtgttcattttctgcattaaa
ttctgcggtcatgtgaagaggcttcagctgaatgagagcccacagaagggacaaggatgg
agaccccctggagttgttctgtccagatgggtccccatcaccgacaacagctggcaggtt
ctcttctctactctcagggtcagtggaggcctgagggagctggaccttagtggaaattcg
ctaagtcactctgcagtgcagaatcttcgtaggaccctgagaccacctctgtgctacctg
gagaccttgaggttggccagctgtggcctcaccgctgaaagctgcaaagaccttgccata
gggctgagcaccagcgagaccttgactgagctggagctgaacttcaacttgctaacagat
tctggagcccagcaccttttccagagtttgagtcagaggtattgcaagctacagcgattg
cgactggtcagctgtggcctcacttccagctgctgccaggacctggcctctgcactcagc
gtcagccccagactgttggagctagacctgcaacagaatgacctgggcgaccatggagtg
aggctgctctacaaggggctcaagcatccagcctgccaactcacactcctgtggctggac
tacatccctttgagtgaccaggtgagggaagagctgaaggccctggaagaagagataccc
aggctgctcatctccagcagatggaagccaagtgtgatgatccctactggggacccggat
gaaggacagatgggtgagaacatgtcctcactcaagcgacagagaccacaatcagaggaa
agctccccacaagtagcacaagtggaacccttccatctgtcttctcatgcctctgctgag
gacttgcacatggagcctctggggactgaagataacttctggggccccacagggcctgtg
gctactgagatggtagacaaagagaagagcttgtaccgagttcatttccccatggctggc
tcctactgctggtccaacacgggtctcacctttgtggtgagaagggcggtgaccatcgag
attgagttctgtgcgtgggaccagttcctgggcaacactatcccaccgcagagctggatg
gtggcagggcctctgtttgacatcaaagctgaacagggagctgtggccgctgtgtacctg
cctcactttgtggccctccaagaggggcctgtggacatctccctgttccatgtggcccac
tttaaagaggaagggatgctcctggagaagccaagcagggtggagccacactatgcagtc
ctggaggatcccagcttctccccgatgggaatcttgctgagaatgatccccaccgccctg
tgcttcatccctatcacctccaccacactgctgtaccatcaactccatcccaaggagatc
acctccttccacctctacctgatccctagtgactgctccattcagaaggccatagatgat
gaagaaaagaagttccaatttgtgcgaatacataagccacccccagtgacccccctttac
ctgggatcccgctatactgtgtctgcttcaaggaagctggaaatcatccccaaggaactg
gagctctgctatcggagccccagagaacctcagctcttctctgagttctacattggccac
ttggggtcagggatcaggctgcaaatcaaaaacaagaaaggtggaactgtagtatggaag
gcccagctgaaaccaggagacctcagacctgcagccactccgatccctccagtcaccaaa
gatgccttgggctcactgcactttgtggaccggcatcgggaacagctggtggcccgagtg
acatctgtggaccctgtcttggacaagctgcatggacaggtgctgagcgaagaacagtat
gagaaggtacgggcagagaccaccaagccgggccagatgcgcaagctctttagcttcagc
cggtcctgggactgggcctgcaaagaccagctctaccgagctttgaaggagattcatcct
catctgattgtggaactctgggagaagtgggggggagacttagggagtctctga
DBGET
integrated database retrieval system
