KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101954451
Entry
101954451         CDS       T10664                                 
Symbol
Bdnf
Name
(RefSeq) brain-derived neurotrophic factor isoform X2
  KO
K04355  brain-derived neurotrophic factor
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04010  MAPK signaling pathway
iti04014  Ras signaling pathway
iti04024  cAMP signaling pathway
iti04151  PI3K-Akt signaling pathway
iti04722  Neurotrophin signaling pathway
iti05016  Huntington disease
iti05022  Pathways of neurodegeneration - multiple diseases
iti05030  Cocaine addiction
iti05034  Alcoholism
Brite
KEGG Orthology (KO) [BR:iti00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    101954451 (Bdnf)
   04014 Ras signaling pathway
    101954451 (Bdnf)
   04024 cAMP signaling pathway
    101954451 (Bdnf)
   04151 PI3K-Akt signaling pathway
    101954451 (Bdnf)
 09150 Organismal Systems
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    101954451 (Bdnf)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    101954451 (Bdnf)
   05022 Pathways of neurodegeneration - multiple diseases
    101954451 (Bdnf)
  09165 Substance dependence
   05030 Cocaine addiction
    101954451 (Bdnf)
   05034 Alcoholism
    101954451 (Bdnf)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:iti04052]
    101954451 (Bdnf)
Cytokines and neuropeptides [BR:iti04052]
 Cytokines
  Growth factors (RTK binding)
   101954451 (Bdnf)
SSDB
Motif
Pfam: NGF NTF3_N Spaetzle
Other DBs
NCBI-GeneID: 101954451
NCBI-ProteinID: XP_005328106
UniProt: A0A287D5J1
LinkDB
Position
Unknown
AA seq 255 aa
MFHQVRRVMTILFLTMVISYFGCMKAAPMKEANVRGQGSLAYPGVRTHGTLESVNGPKAG
SRGLTSLADTFEHVIEELLDEDQKVRPHEENNKDADLYTSRVMLSSQVPLEPPLLFLLEE
YKNYLDAANMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPV
SKGQLKQYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIR
IDTSCVCTLTIKRGR
NT seq 768 nt   +upstreamnt  +downstreamnt
atgttccaccaggtgagaagagtgatgaccatccttttccttactatggttatttcatac
tttggttgcatgaaggctgcccccatgaaagaagccaacgtccgaggacaaggcagcttg
gcctacccaggtgtgcggacccatgggactctggagagcgtgaatgggcccaaggcaggt
tcacgaggcctcacctcattggctgacacttttgaacacgtgattgaagagctgttggat
gaggaccagaaagttcggccccatgaagaaaacaataaggacgcggacttgtacacttcc
agggtgatgctcagtagtcaagtgcctttggagcctcctcttctctttctgcttgaggaa
tacaaaaattacctggatgctgcaaacatgtctatgagggtccggcgccactccgaccct
gcccgccgcggggagctcagtgtgtgtgacagtattagtgagtgggtaacagcggcagat
aaaaagactgcagtggacatgtcgggtggcaccgtcaccgtcctggaaaaagtccctgtg
tcgaaaggccaactgaagcaatacttctacgagaccaagtgcaatcccatgggctacacg
aaagaaggctgcaggggcatagacaaaaggcactggaactcccagtgccgaactacccag
tcgtacgtgcgggccctcaccatggatagcaaaaagcgcattggctggcggttcataagg
atagacacttcctgtgtatgtacattgaccattaagaggggaagatag

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