KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101955450
Entry
101955450         CDS       T10664                                 
Symbol
Sqstm1
Name
(RefSeq) sequestosome-1 isoform X1
  KO
K14381  sequestosome 1
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04137  Mitophagy - animal
iti04140  Autophagy - animal
iti04217  Necroptosis
iti04218  Cellular senescence
iti04380  Osteoclast differentiation
iti05014  Amyotrophic lateral sclerosis
iti05022  Pathways of neurodegeneration - multiple diseases
iti05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:iti00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    101955450 (Sqstm1)
   04137 Mitophagy - animal
    101955450 (Sqstm1)
  09143 Cell growth and death
   04217 Necroptosis
    101955450 (Sqstm1)
   04218 Cellular senescence
    101955450 (Sqstm1)
 09150 Organismal Systems
  09158 Development and regeneration
   04380 Osteoclast differentiation
    101955450 (Sqstm1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    101955450 (Sqstm1)
   05022 Pathways of neurodegeneration - multiple diseases
    101955450 (Sqstm1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    101955450 (Sqstm1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:iti04131]
    101955450 (Sqstm1)
   03029 Mitochondrial biogenesis [BR:iti03029]
    101955450 (Sqstm1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:iti04147]
    101955450 (Sqstm1)
Membrane trafficking [BR:iti04131]
 Autophagy
  Mitophagy
   Cargo receptors
    101955450 (Sqstm1)
  Pexophagy
    101955450 (Sqstm1)
  Aggrephagy
    101955450 (Sqstm1)
  Xenophagy
    101955450 (Sqstm1)
  ER-phagy
   ER-phagy recepters
    101955450 (Sqstm1)
  Other autophagy associated proteins
   Midbophagy
    101955450 (Sqstm1)
Mitochondrial biogenesis [BR:iti03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    101955450 (Sqstm1)
Exosome [BR:iti04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   101955450 (Sqstm1)
SSDB
Motif
Pfam: UBA_5 PB1 ZZ
Other DBs
NCBI-GeneID: 101955450
NCBI-ProteinID: XP_005339398
UniProt: A0A287DFX9
LinkDB
Position
Unknown
AA seq 440 aa
MASLTVKAYLLGKEEAAREIRRFSFCFSPEPEAEAEAAAGPGPCERLLSRVAALFPALRP
GGFQAHYRDEDGDLVAFSSDEELTMAMSYVKEDIFRIYIKEKKECRRDHRAPCAQEAPRS
MVHPNVICDGCNGPVVGTRYKCSVCPDYDLCGVCEGKGMHREHSKLVFPSPFGHHSEGFS
HSRWLRKLKHGHFGWPGWEMGPPGNWSPRPPRAGDTRPHPTAESASGPSEDPSVNFLKNV
GESVAAALSPLGIEVDIDVEHGGKRSRLTPVSPESSSMEDKCSSQPSSCSSEPNKPDGNG
EGMAQSLAEQMKKIALESMGQPEEQMESDNCSGGDEDWTHLSSKEVDPSTGELQSLQMPE
SEGPSSLDPSQEGPTGLKEAALYPHLPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQTK
NYDIGAALDTIQYSKHPPPL
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggcgtcgctcaccgtgaaggcctaccttttgggcaaggaggaagcagcgcgtgagatc
cgccgcttcagcttctgtttcagccctgagcctgaggctgaagccgaggccgctgccggc
ccagggccctgcgagcggctactgagccgggtcgccgccctgttccccgcgctgcgtccg
ggtggcttccaggcgcactaccgcgatgaggatggagacttggttgccttttccagtgac
gaggagctgacaatggccatgtcctatgtgaaggaagacatcttccgcatctacattaaa
gagaagaaggagtgccggcgagaccaccgtgccccatgtgctcaggaggcaccccgcagc
atggtgcaccccaatgtgatctgtgatggttgtaatgggcctgtcgtgggaactcgctat
aagtgcagtgtgtgcccagactatgacctatgtggtgtctgtgaggggaagggcatgcac
agggagcatagcaaacttgtgttccccagcccctttgggcaccattctgagggcttctct
catagccgctggctccggaagttgaaacatgggcatttcgggtggccaggctgggagatg
ggtccaccaggaaactggagcccacgtcctcctcgagcgggagatacccgcccccacccc
acggcagaatcagcttctggtccatcggaggatcccagtgtgaatttcctcaagaatgta
ggggagagcgtggcagctgccctcagccctctgggtattgaagttgatattgatgtggag
catggagggaaaagaagccgcctgacacctgtctccccagaaagttccagcatggaagac
aagtgtagttctcagccaagcagctgctcttctgaacccaacaaaccagatgggaatggc
gagggtatggcacaatcgctggcagagcaaatgaaaaagatagccctggagtcgatgggg
cagcctgaggaacagatggagtctgataactgttcgggaggagatgaggactggactcat
ttgtcttcaaaagaagtggacccatctacaggtgaactgcagtctctacagatgccagaa
tcagaagggccaagctctctggatccttcccaggaaggacccacagggctgaaggaagct
gctttgtacccacatcttccaccagaggctgacccccggctgattgagtcgctttctcag
atgctgtccatggggttctcggatgaaggcggctggctcaccaggcttctacagaccaaa
aattacgacattggggctgctctggatactatccagtattcgaaacacccaccgccattg
tga

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