Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101955670
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Entry
101955670 CDS
T10664
Symbol
Rapgef4
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 4
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04015
Rap1 signaling pathway
iti04024
cAMP signaling pathway
iti04072
Phospholipase D signaling pathway
iti04081
Hormone signaling
iti04261
Adrenergic signaling in cardiomyocytes
iti04670
Leukocyte transendothelial migration
iti04911
Insulin secretion
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
101955670 (Rapgef4)
04072 Phospholipase D signaling pathway
101955670 (Rapgef4)
04024 cAMP signaling pathway
101955670 (Rapgef4)
09133 Signaling molecules and interaction
04081 Hormone signaling
101955670 (Rapgef4)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
101955670 (Rapgef4)
09152 Endocrine system
04911 Insulin secretion
101955670 (Rapgef4)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
101955670 (Rapgef4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101955670 (Rapgef4)
Membrane trafficking [BR:
iti04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
101955670 (Rapgef4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
Motif
Other DBs
NCBI-GeneID:
101955670
NCBI-ProteinID:
XP_005324658
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
MVAAHAAHSSSSAEWIACLDKRPLERSSEDVDIIFTRLKEVKAFEKFHPNLLHQICLCGY
YENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGESILDN
TPRHATIVTRESSELLRIEQKDFKALWEKYRQYMAGLLAPPYGVMETGSNNDRIPDKENT
PLIEPHVPLRPANTITKVPSEKILRAGKILRNAILSRAPHMIRDRKYHLKTYRQCCVGTE
LVDWMMQQTPCVHSRTQAVGMWQVLLEDGVLNHVDQEHHFQDKYLFYRFLDDEHEDAPLP
TEEEKKECDEELQDTMLLLSQMGPDAHMRMILRKPPGQRTMDDLEIIYEELLHIKALSHL
STTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDD
FGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHDQDVLVLEKV
PAGSRASNQGNSQPQQKYTVMSGTPEKILEHFLETIRLEPALNEATDSVLNDFIMMHCVF
MPNTQLCPALVAHYHAQPSQGTEQERMDYALNNKRRVIRLVLQWAAMYGDLLQEDDVAMA
FLEEFYVSVSDDARMIAALKEQLPELEKIVKQISEDAKAPQKKHKVLLQQFNTSDERAQK
RQPVRGSDEVLFKVYCMDHTYTTIRVPVAASVKEVISAVADKLGSGEGLIIVKMSSGGEK
VVLKPNDVSVFTTLTINGRLFACPXEQFDSLTPLPEQEGPTVGTVGTFELMSSKDLAYQM
TIYDWELFNCVHELELIYHTFGRHNFKKTTANLDLFLRRFNEIQFWVVTEICLCSQLSKR
VQLLKKFIKIAAHCKEYRNLNSFFAIVMGLSNVAVSRLALTWEKLPSKFKKFYAEFESLM
DPSRNHRAYRLTAAKLEPPLIPFMPLLIKDMTFTHEGNKTFIDNLVNFEKMRMIANTART
VRYYRSQPFNPDAAQANKNHQDVRSYVRQLNVIDNQRTLSQMSHRLEPRRP
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggtcgctgcgcacgctgcccattcttcctcctctgccgagtggatcgcctgcttggat
aaaagacccctggaacgatccagtgaagatgtggatataatcttcacacgactgaaggaa
gttaaagcttttgagaaatttcaccccaatctccttcatcagatttgtttatgtggttat
tatgagaatttggaaaaaggaataacattatttcgccagggtgatattgggacaaactgg
tatgctgtcctggcagggtctttggatgttaaagtatctgagaccagcagtcaccaggat
gcggtgaccatctgcaccctggggattgggacagcctttggagagtccattttggacaac
acgccccgccatgcgaccatcgttaccagggagagcagcgaactgctccgcatcgagcag
aaggacttcaaggcactatgggagaaatatcggcagtatatggcaggacttctggctcct
ccttatggtgttatggaaacgggctctaacaatgacaggattcctgacaaggagaacaca
cctctcattgaacctcacgttcctcttcgtcctgctaacaccattaccaaggttccttca
gagaagatcctcagggctggaaaaattttacgaaatgccattctctctcgagcccctcac
atgataagagataggaaataccacctcaagacatacagacaatgctgtgtgggaaccgag
ctggtggactggatgatgcaacagactccttgtgttcactcccggactcaagctgttggc
atgtggcaagtcctattagaagacggtgtcctcaaccatgtggaccaggaacaccatttc
caagacaaatatttattttaccgatttctggatgacgagcatgaggatgcccctttgcct
actgaagaggagaagaaggagtgtgacgaggagctccaggacaccatgctgctactgtcg
cagatgggccccgatgcccacatgaggatgatcctgcgcaaaccacctggccaaaggact
atggatgacctggagattatctacgaagagctccttcatattaaagccttatctcatctt
tctaccacagtgaaacgggagttagcaggtgttctcatttttgagtctcatgccaaagga
gggaccgtcctgtttaaccagggggaagaaggtacctcctggtacattattctaaaagga
tcagtgaatgtagtcatttatggcaagggtgtggtctgcaccctgcatgagggagatgac
tttggcaagttagcactagtgaacgatgctccgcgagctgcctcaatcgtcttgcgagag
gataattgtcatttcctaagagtcgacaaggaggatttcaaccggattctgagggacgtt
gaggcgaacacagtcagacttaaagaacatgaccaagatgtcttggtgctggagaaggtc
ccagcagggagcagagcttctaatcaaggaaactcacagcctcagcaaaagtatactgtg
atgtcagggacacctgaaaaaattttagagcattttctagaaacaatacgccttgagcca
gctttaaatgaagcaacagattctgttttaaatgactttattatgatgcactgtgttttt
atgccaaatacccagctttgccctgccctggtggcccattaccatgcacagccttctcaa
ggtacagaacaggagagaatggattatgccctcaacaataagagacgagtcatccgcctg
gttctacagtgggctgccatgtatggagacctcctgcaagaggatgatgtggccatggct
ttcctggaggagttttatgtgtctgtatcagatgatgcccgcatgattgctgccctcaag
gagcaactcccggagttggagaagattgtcaagcaaatttcagaagatgcaaaggctcca
caaaagaagcacaaggttcttttgcaacaattcaacacaagcgatgagagggcccagaag
cgccagcctgtccgtggctctgatgaggtgttgtttaaggtctattgcatggaccacacc
tataccaccattcgggtgcctgtggctgcctcagtgaaggaagtcatcagcgcagttgcc
gacaaactgggctccggagaaggcctgatcatagtcaagatgagttccggaggagaaaag
gtggtgctcaaacctaatgatgtttcggtatttacgacgctcaccattaatggacgcctg
tttgcttgcccgtgagagcaattcgattccctgactcctttaccagaacaagaaggtcca
actgttggaacagtgggaacctttgaactgatgagctccaaagatttagcctaccagatg
acaatttatgattgggaactcttcaactgtgtgcatgagctggagctaatctatcacaca
tttggaaggcataattttaaaaagaccacagcaaacttggatttgttcctgaggagattt
aatgaaattcagttttgggttgtcactgagatttgcctttgttcccagctcagcaaacgt
gttcagctcttaaaaaaatttattaagattgcagcccactgtaaggaatacagaaatctg
aattccttttttgccatcgtcatgggactaagtaatgttgctgttagccgcttggcacta
acgtgggagaaactgccaagcaagttcaagaagttctatgcagagtttgaaagtttaatg
gatccttcgagaaaccacagggcttacaggctgacagcagctaaactggagccccctctc
atccccttcatgcctctgctcattaaagatatgacatttactcatgaggggaacaagacg
ttcattgacaatctagtaaactttgaaaaaatgcgaatgattgcaaacactgccagaaca
gtgaggtactacaggagccagcccttcaatcctgatgcagcgcaagctaataagaaccat
caggatgtccggagttatgtccggcaattaaatgtgattgacaaccagagaactttatca
cagatgtcacaccgattagagccccgtaggccatag
DBGET
integrated database retrieval system
