Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101956027
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Entry
101956027 CDS
T10664
Symbol
Ptprf
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X11
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04514
Cell adhesion molecules
iti04520
Adherens junction
iti04910
Insulin signaling pathway
iti04931
Insulin resistance
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101956027 (Ptprf)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
101956027 (Ptprf)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
101956027 (Ptprf)
09160 Human Diseases
09167 Endocrine and metabolic disease
04931 Insulin resistance
101956027 (Ptprf)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
iti01009
]
101956027 (Ptprf)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101956027 (Ptprf)
Enzymes [BR:
iti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
101956027 (Ptprf)
Protein phosphatases and associated proteins [BR:
iti01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
101956027 (Ptprf)
Cell adhesion molecules [BR:
iti04515
]
Immunoglobulin superfamily
Type II RPTP family
101956027 (Ptprf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
PTP-SAK
Tc-R-P
C2-set_2
DSPc
V-set
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Fn3_PTPRU
Insulin_TMD
DUF3377
ICAM_N
Motif
Other DBs
NCBI-GeneID:
101956027
NCBI-ProteinID:
XP_005317972
UniProt:
I3MG01
LinkDB
All DBs
Position
Unknown
AA seq
1899 aa
AA seq
DB search
MALEPTPGRTMVPLVPALVMLGLVAGAHGDSKPIFVKVPEDQTGLSGGVASFVCQAAGEP
KPRITWMKKGKKVSSQRFEVIEFDDGAGSVLRIQPLRVQRDEAIYECTATNSVGEINTSA
KLSVLEEEQLPSGFPTIDMGPQLKVVEKARTATMLCAAGGNPDPEISWFKDFLPVDPATS
NGRIKQLRSGALQIESSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSS
QEVMPGGSVNLTCVAVGAPMPYVKWMMGAEELTKEDEMPVGRNVLELSNVVRSANYTCVA
ISSLGMIEATAQVTVKALPKPPIDLMVTETTATSVTLTWDSGNSEPVSYYGIQYRATGTE
GPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSPPRRV
QARMLSASTMLVQWEPPEEPNGLVRGYRVYYTPDSRRPLSAWHKHNTDAGLLTTVGSLLP
GITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPADFQAEAESDTRIQLSWLLPPQERI
IKYELVYWAAENEGQQHKVTFDPTSSYTLEDLKPDTLYRFQLAARSDVGVGVFTPTIEAR
TAQSTPSAPPQKVTCVSTGSTTVRVSWVPPPANSRNGIITQYSVAYEAVDGEDRGRHVVD
GISREHFSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVEVEPL
NSTAVHVSWKLPIPSKQHGQIRGYQVTYVRLENGEPRGPPIIQDVMLSEAQETTISSLTP
ETTYSITVAAYTTKGDGARSKPKIVTTTGAVPGRPTMMVSTTAMNTALLQWHPPKELPGE
LLGYRLQYRRADEARPNTIDFGKDDQHFTVTGLHKGATYIFRLAAKNRAGPGEEFEKEIT
TPEDVPSGFPQNLRVTGLTTTTTELAWDPPVLAERNGRITNYTVVYRDINSQQELQNISA
DTHLTLSGLKPDTTYDIKVRARTSKGAGPLSPSIQSRTMPVEQVFAKNFRVAAAMKTSVL
LSWEVPDSYKSAVPFKILYNGQSVEVDGHSMRKLIADLQPNTEYSFVLMNRGSSAGGLQH
LVSIRTAPDLLPHKPLPASAYIEDGRFALSMPQVEDPSLVKWFYIVVVPIDRVGGNILTP
RWNTPEELELDELLEAIEQGGEERRRRRRRQTERLKPYVAAQMDVLPETFTLGDKKSYRG
FYNRPLSPDLSYQCFVLASLKEPVDQKRYASSPYSDEIVVQVTPAQQQEEPEMLWVTGPV
LAVILIILIVIAILLFKRKRTHSPSSKDEQSIGLKDSLLAHSSDPVEMRRLNYQTPGMRD
HPPIPITDLADNIERLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIAYD
HSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWEQRTATVVM
MTRLEEKSRVKCDQYWPARGTETYGLIQVTLLDTVELATYTMRTFALHKSGSSEKRELRQ
FQFMAWPDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGCFIVIDAMLERM
KHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAATCGHTEVPARNLYAHIQKLG
QVPPGESVTAMELEFKLLASSKAHTSRFISANLPCNKFKNRLVNIMPYELTRVCLQPIRG
VEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTKLREMGREK
CHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGV
PKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMF
QTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atggcccttgagccaaccccagggaggacgatggtgccccttgtacccgcgctggtgatg
cttggtttggtggcaggtgcccatggcgacagcaaacctatctttgttaaggtccctgag
gaccagactgggctatcaggaggggtggcctccttcgtgtgccaagccgcaggggaaccc
aagcctcgcatcacttggatgaagaaggggaagaaagttagctcccagcgcttcgaggta
attgagtttgatgatggggcagggtcagtgctacggatccagccattacgggtgcagcgg
gatgaggccatctatgaatgcaccgccaccaacagtgtgggcgagatcaacaccagtgcc
aagctctcagtacttgaagaggaacagctgccatctgggttccccaccatcgacatgggg
cctcagctgaaggtggtggagaaggcgcgcacggccaccatgctgtgtgcagctggtggg
aatccagatcctgagatctcttggttcaaagacttccttcctgtggaccccgccaccagc
aatgggcgcatcaaacagctgcgttcaggtgccttgcagattgagagcagcgaagagtca
gaccaaggcaagtacgagtgtgtggcaaccaactcagcaggcacacgctactcggcccct
gcgaacctgtatgtgcgagtgcgccgtgtggctcctcgtttctccatccctcctagcagc
caggaggtgatgccaggtggcagtgtgaacctgacttgtgttgcggtgggtgcacccatg
ccttatgtgaagtggatgatgggggccgaagagctcaccaaggaggatgagatgcctgtc
ggccgcaacgtgctggagctcagcaatgttgtgcgctctgccaactacacctgtgtggcc
atctcctcgctgggcatgattgaagccacagcccaggtcacagtgaaagctttgccgaag
cctccgattgatcttatggtcacagagacaactgccaccagtgtcaccctgacctgggac
tctgggaactcagagcctgtatcatactacggcatacagtaccgtgccactggcacagaa
ggccccttccaggaggtggatggtgtagccaccacccgatacagcattggtggcctcagc
cctttctcagaatatgcctttcgtgtgttggcggtgaacagcatcgggcgagggccaccg
agtgaggccgtgcgggcacgcacgggtgagcaggcaccctccagtcctccacgtcgtgtg
caggcccgcatgctgagcgccagcaccatgctggtgcagtgggagccacctgaggagccg
aacggcctggtgcgcggataccgtgtctattatactccagactcccgccgccccctgagt
gcctggcacaagcacaatactgatgcagggctcctcaccactgtgggcagcctgctgcct
ggcatcacctacagcctgcgtgtgctcgcctttactgccgtgggtgatggcccacccagc
cccaccatccaggtcaagacgcaacagggagtgcctgcacagcccgcggacttccaggct
gaggctgaatcggacaccaggatccagctttcatggctgctgcccccgcaggagcggatc
atcaaatatgagctggtatactgggcagcagagaatgaaggccagcagcacaaggtgacc
ttcgaccccacctcctcctacactttagaggacctgaagcccgacacgctgtaccgcttc
cagctggctgcccgctcagatgtgggtgtgggcgtcttcacccccaccatagaggcccgc
acagcacagtccaccccctccgcccctccccagaaggtgacatgtgtgagcacgggttcc
accacggtccgggtaagttgggtcccaccgccagcgaacagccgcaacggcattatcacg
cagtactccgtggcttatgaggcggtggacggcgaggaccgcgggcgacatgtggtggat
ggcatcagccgtgagcatttcagctgggacctggtgggcctggagaagtggacggagtac
cgggtgtgggtgcgggcacacacagatgtgggccctggcccggagagcagcccggtgctg
gtgcgcaccgacgaggacgtgcccagtgggccaccaaggaaggtggaggtggagccgctg
aactccactgccgtgcatgtctcctggaagctgcctatccccagcaagcagcatggccag
attcgaggctaccaggtcacctatgtgcgtctagagaatggcgagccccgaggtccaccc
atcatccaagatgtcatgctgtctgaggcccaggaaactaccatcagcagcctcacccca
gagactacctactccattactgtcgctgcctacaccaccaagggggatggtgcccgaagc
aagcccaaaattgttacaaccactggggcagtcccaggccgacccaccatgatggtcagc
accacagccatgaacacggcgctacttcagtggcacccacccaaggagctgcctggtgag
ctgctgggctaccggttgcaataccgccgggccgatgaggcgcggcctaacaccatagat
tttggcaaagatgatcagcactttacagtcaccggtctgcacaagggggccacctacatc
ttccggcttgctgccaagaaccgggccggcccaggcgaggagttcgagaaggagattaca
acccctgaggatgtgcctagtggctttccccaaaacctacgagtgacaggactgaccacg
actaccaccgaattggcctgggacccaccagtgctagcagagaggaatgggcgcatcacc
aactacactgtggtgtaccgtgacatcaatagccagcaggagctgcaaaacatctctgct
gacacacaccttactctgtctggcctcaagccggacaccacttatgacatcaaggtccgt
gcacgtaccagcaaaggcgccggtccactcagccccagtatccagtcccggaccatgcct
gtggagcaagtgtttgctaagaacttccgtgtggcagctgcaatgaagacatctgtgctg
ctcagctgggaggtccctgactcctacaagtctgctgtgccctttaagattctgtacaat
ggacaaagtgtggaggtggatgggcactcgatgcggaagctgatcgcagacctgcagcct
aacacagagtactcatttgtgctgatgaaccgtggcagtagtgcgggaggcctgcagcac
ctggtgtccatccgcacggctcctgatctcctgccacacaaaccgctgcctgcttctgcc
tacatagaggatggccgctttgccctctctatgcctcaagtggaggacccctcactggtc
aagtggttctacatcgtggtggtgcccattgaccgtgtgggtggaaacatactcacacca
agatggaacacacctgaggagctggagctggatgagcttctggaagctattgagcagggt
ggtgaggagcggcggcggcggcggcggagacagacagagcggctaaagccgtatgtagct
gctcagatggatgtgctccccgagacttttaccctgggggacaagaagagctaccgaggc
ttctacaaccgacccctgtctccagacctgagttaccagtgcttcgtgcttgcctccctg
aaggaacctgtggatcagaagcgctatgcctccagcccctactcggatgagatcgtggta
caggtgacaccagctcagcagcaggaggagcccgagatgctgtgggtgacaggccccgtc
ctggcagtcatcctcatcatactcattgtcatcgccatcctcctgttcaagaggaaaagg
acccactccccatcatcaaaggatgagcaatcaattgggctgaaggactccctcctggcc
cactcctctgaccctgtggagatgcgaagactcaactaccagaccccaggtatgcgagac
cacccacccatacccatcaccgatctggcagacaacattgaacgcctcaaagccaatgat
ggcctcaagttctcccaggagtatgagtctattgaccctggacagcagttcacatgggag
aattccaacctggaggtgaacaagcccaaaaaccgctacgcaaatgtcattgcctacgac
cactctcgagtcatccttacctccatcgatggtgtaccagggagtgactacatcaatgcc
aattacatcgatggctatcgcaagcagaacgcctacattgccacacagggcccactacct
gagaccatgggtgatttctggcggatggtgtgggaacagcgtacggccactgtggtcatg
atgacgcggctggaagagaagtcccgggtgaagtgtgatcagtactggccagctcgtggc
actgagacttacggcctcattcaggtgacactgctggacactgtggagctggccacatat
actatgcgcacctttgctctccacaagagtggctctagtgagaagcgtgagctgcgtcag
ttccagttcatggcctggccagaccatggggttcccgagtacccaactcccatcctagcc
ttcctgagacgggtcaaagcctgcaacccgctagatgcagggcctatggtggtacactgc
agtgctggtgtgggccgtactggctgcttcatcgttatcgatgccatgctggaacgaatg
aagcatgaaaagacagttgacatctatggccatgtgacatgcatgagatcgcagagaaac
tatatggtgcagacagaggaccagtatgtgttcatccatgaggcgctgttggaggctgcc
acatgtggacacacagaggtgcctgcccgcaacctctacgcccatatccagaagctgggc
caagtgcctccaggggagagtgtgactgccatggagctcgaattcaagttgctggccagc
tccaaggcccacacatctcgcttcatcagtgccaacctgccctgcaacaagttcaagaac
cgcctggtgaacatcatgccctatgaactgacccgggtgtgtctgcagcccatccgtggt
gtggaaggctctgactatatcaatgccagtttcctggatggctatagacagcagaaggcc
tacatagctacacaggggcctctggcagagagcaccgaggacttctggcgcatgctatgg
gagcacaattccaccatcatcgtcatgctgaccaaacttcgggagatgggcagggagaag
tgccaccagtactggccagcagagcgttctgctcgctaccagtactttgttgtcgacccg
atggctgagtacaacatgccccagtacatcctgcgtgagttcaaagtcacagatgctcgg
gatgggcagtcgaggacaatccggcagttccagttcacagactggccagagcagggtgtt
cccaagacaggagagggcttcatagacttcatcgggcaagtgcacaagaccaaggagcag
tttgggcaggatggtcccatcacagtacactgcagtgctggtgtgggccgcacgggagta
ttcatcactctgagtattgtcctggaacgcatgcgctacgagggtgtggttgacatgttc
cagactgtgaagaccctgcgcacacagcgtcctgcaatggtgcagacagaggaccagtac
cagctgtgctaccgtgcggccctggagtacctcggcagctttgaccactatgcaacgtaa
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integrated database retrieval system
