Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101956027
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Entry
101956027 CDS
T10664
Symbol
Ptprf
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X11
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04514
Cell adhesion molecules
iti04520
Adherens junction
iti04910
Insulin signaling pathway
iti04931
Insulin resistance
Brite
Enzymes [BR:
iti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
101956027 (Ptprf)
Protein phosphatases and associated proteins [BR:
iti01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
101956027 (Ptprf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101956027
NCBI-ProteinID:
XP_005317972
UniProt:
I3MG01
LinkDB
All DBs
Position
Unknown
AA seq
1899 aa
AA seq
DB search
MALEPTPGRTMVPLVPALVMLGLVAGAHGDSKPIFVKVPEDQTGLSGGVASFVCQAAGEP
KPRITWMKKGKKVSSQRFEVIEFDDGAGSVLRIQPLRVQRDEAIYECTATNSVGEINTSA
KLSVLEEEQLPSGFPTIDMGPQLKVVEKARTATMLCAAGGNPDPEISWFKDFLPVDPATS
NGRIKQLRSGALQIESSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSS
QEVMPGGSVNLTCVAVGAPMPYVKWMMGAEELTKEDEMPVGRNVLELSNVVRSANYTCVA
ISSLGMIEATAQVTVKALPKPPIDLMVTETTATSVTLTWDSGNSEPVSYYGIQYRATGTE
GPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSPPRRV
QARMLSASTMLVQWEPPEEPNGLVRGYRVYYTPDSRRPLSAWHKHNTDAGLLTTVGSLLP
GITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPADFQAEAESDTRIQLSWLLPPQERI
IKYELVYWAAENEGQQHKVTFDPTSSYTLEDLKPDTLYRFQLAARSDVGVGVFTPTIEAR
TAQSTPSAPPQKVTCVSTGSTTVRVSWVPPPANSRNGIITQYSVAYEAVDGEDRGRHVVD
GISREHFSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVEVEPL
NSTAVHVSWKLPIPSKQHGQIRGYQVTYVRLENGEPRGPPIIQDVMLSEAQETTISSLTP
ETTYSITVAAYTTKGDGARSKPKIVTTTGAVPGRPTMMVSTTAMNTALLQWHPPKELPGE
LLGYRLQYRRADEARPNTIDFGKDDQHFTVTGLHKGATYIFRLAAKNRAGPGEEFEKEIT
TPEDVPSGFPQNLRVTGLTTTTTELAWDPPVLAERNGRITNYTVVYRDINSQQELQNISA
DTHLTLSGLKPDTTYDIKVRARTSKGAGPLSPSIQSRTMPVEQVFAKNFRVAAAMKTSVL
LSWEVPDSYKSAVPFKILYNGQSVEVDGHSMRKLIADLQPNTEYSFVLMNRGSSAGGLQH
LVSIRTAPDLLPHKPLPASAYIEDGRFALSMPQVEDPSLVKWFYIVVVPIDRVGGNILTP
RWNTPEELELDELLEAIEQGGEERRRRRRRQTERLKPYVAAQMDVLPETFTLGDKKSYRG
FYNRPLSPDLSYQCFVLASLKEPVDQKRYASSPYSDEIVVQVTPAQQQEEPEMLWVTGPV
LAVILIILIVIAILLFKRKRTHSPSSKDEQSIGLKDSLLAHSSDPVEMRRLNYQTPGMRD
HPPIPITDLADNIERLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIAYD
HSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWEQRTATVVM
MTRLEEKSRVKCDQYWPARGTETYGLIQVTLLDTVELATYTMRTFALHKSGSSEKRELRQ
FQFMAWPDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGCFIVIDAMLERM
KHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAATCGHTEVPARNLYAHIQKLG
QVPPGESVTAMELEFKLLASSKAHTSRFISANLPCNKFKNRLVNIMPYELTRVCLQPIRG
VEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTKLREMGREK
CHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGV
PKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMF
QTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atggcccttgagccaaccccagggaggacgatggtgccccttgtacccgcgctggtgatg
cttggtttggtggcaggtgcccatggcgacagcaaacctatctttgttaaggtccctgag
gaccagactgggctatcaggaggggtggcctccttcgtgtgccaagccgcaggggaaccc
aagcctcgcatcacttggatgaagaaggggaagaaagttagctcccagcgcttcgaggta
attgagtttgatgatggggcagggtcagtgctacggatccagccattacgggtgcagcgg
gatgaggccatctatgaatgcaccgccaccaacagtgtgggcgagatcaacaccagtgcc
aagctctcagtacttgaagaggaacagctgccatctgggttccccaccatcgacatgggg
cctcagctgaaggtggtggagaaggcgcgcacggccaccatgctgtgtgcagctggtggg
aatccagatcctgagatctcttggttcaaagacttccttcctgtggaccccgccaccagc
aatgggcgcatcaaacagctgcgttcaggtgccttgcagattgagagcagcgaagagtca
gaccaaggcaagtacgagtgtgtggcaaccaactcagcaggcacacgctactcggcccct
gcgaacctgtatgtgcgagtgcgccgtgtggctcctcgtttctccatccctcctagcagc
caggaggtgatgccaggtggcagtgtgaacctgacttgtgttgcggtgggtgcacccatg
ccttatgtgaagtggatgatgggggccgaagagctcaccaaggaggatgagatgcctgtc
ggccgcaacgtgctggagctcagcaatgttgtgcgctctgccaactacacctgtgtggcc
atctcctcgctgggcatgattgaagccacagcccaggtcacagtgaaagctttgccgaag
cctccgattgatcttatggtcacagagacaactgccaccagtgtcaccctgacctgggac
tctgggaactcagagcctgtatcatactacggcatacagtaccgtgccactggcacagaa
ggccccttccaggaggtggatggtgtagccaccacccgatacagcattggtggcctcagc
cctttctcagaatatgcctttcgtgtgttggcggtgaacagcatcgggcgagggccaccg
agtgaggccgtgcgggcacgcacgggtgagcaggcaccctccagtcctccacgtcgtgtg
caggcccgcatgctgagcgccagcaccatgctggtgcagtgggagccacctgaggagccg
aacggcctggtgcgcggataccgtgtctattatactccagactcccgccgccccctgagt
gcctggcacaagcacaatactgatgcagggctcctcaccactgtgggcagcctgctgcct
ggcatcacctacagcctgcgtgtgctcgcctttactgccgtgggtgatggcccacccagc
cccaccatccaggtcaagacgcaacagggagtgcctgcacagcccgcggacttccaggct
gaggctgaatcggacaccaggatccagctttcatggctgctgcccccgcaggagcggatc
atcaaatatgagctggtatactgggcagcagagaatgaaggccagcagcacaaggtgacc
ttcgaccccacctcctcctacactttagaggacctgaagcccgacacgctgtaccgcttc
cagctggctgcccgctcagatgtgggtgtgggcgtcttcacccccaccatagaggcccgc
acagcacagtccaccccctccgcccctccccagaaggtgacatgtgtgagcacgggttcc
accacggtccgggtaagttgggtcccaccgccagcgaacagccgcaacggcattatcacg
cagtactccgtggcttatgaggcggtggacggcgaggaccgcgggcgacatgtggtggat
ggcatcagccgtgagcatttcagctgggacctggtgggcctggagaagtggacggagtac
cgggtgtgggtgcgggcacacacagatgtgggccctggcccggagagcagcccggtgctg
gtgcgcaccgacgaggacgtgcccagtgggccaccaaggaaggtggaggtggagccgctg
aactccactgccgtgcatgtctcctggaagctgcctatccccagcaagcagcatggccag
attcgaggctaccaggtcacctatgtgcgtctagagaatggcgagccccgaggtccaccc
atcatccaagatgtcatgctgtctgaggcccaggaaactaccatcagcagcctcacccca
gagactacctactccattactgtcgctgcctacaccaccaagggggatggtgcccgaagc
aagcccaaaattgttacaaccactggggcagtcccaggccgacccaccatgatggtcagc
accacagccatgaacacggcgctacttcagtggcacccacccaaggagctgcctggtgag
ctgctgggctaccggttgcaataccgccgggccgatgaggcgcggcctaacaccatagat
tttggcaaagatgatcagcactttacagtcaccggtctgcacaagggggccacctacatc
ttccggcttgctgccaagaaccgggccggcccaggcgaggagttcgagaaggagattaca
acccctgaggatgtgcctagtggctttccccaaaacctacgagtgacaggactgaccacg
actaccaccgaattggcctgggacccaccagtgctagcagagaggaatgggcgcatcacc
aactacactgtggtgtaccgtgacatcaatagccagcaggagctgcaaaacatctctgct
gacacacaccttactctgtctggcctcaagccggacaccacttatgacatcaaggtccgt
gcacgtaccagcaaaggcgccggtccactcagccccagtatccagtcccggaccatgcct
gtggagcaagtgtttgctaagaacttccgtgtggcagctgcaatgaagacatctgtgctg
ctcagctgggaggtccctgactcctacaagtctgctgtgccctttaagattctgtacaat
ggacaaagtgtggaggtggatgggcactcgatgcggaagctgatcgcagacctgcagcct
aacacagagtactcatttgtgctgatgaaccgtggcagtagtgcgggaggcctgcagcac
ctggtgtccatccgcacggctcctgatctcctgccacacaaaccgctgcctgcttctgcc
tacatagaggatggccgctttgccctctctatgcctcaagtggaggacccctcactggtc
aagtggttctacatcgtggtggtgcccattgaccgtgtgggtggaaacatactcacacca
agatggaacacacctgaggagctggagctggatgagcttctggaagctattgagcagggt
ggtgaggagcggcggcggcggcggcggagacagacagagcggctaaagccgtatgtagct
gctcagatggatgtgctccccgagacttttaccctgggggacaagaagagctaccgaggc
ttctacaaccgacccctgtctccagacctgagttaccagtgcttcgtgcttgcctccctg
aaggaacctgtggatcagaagcgctatgcctccagcccctactcggatgagatcgtggta
caggtgacaccagctcagcagcaggaggagcccgagatgctgtgggtgacaggccccgtc
ctggcagtcatcctcatcatactcattgtcatcgccatcctcctgttcaagaggaaaagg
acccactccccatcatcaaaggatgagcaatcaattgggctgaaggactccctcctggcc
cactcctctgaccctgtggagatgcgaagactcaactaccagaccccaggtatgcgagac
cacccacccatacccatcaccgatctggcagacaacattgaacgcctcaaagccaatgat
ggcctcaagttctcccaggagtatgagtctattgaccctggacagcagttcacatgggag
aattccaacctggaggtgaacaagcccaaaaaccgctacgcaaatgtcattgcctacgac
cactctcgagtcatccttacctccatcgatggtgtaccagggagtgactacatcaatgcc
aattacatcgatggctatcgcaagcagaacgcctacattgccacacagggcccactacct
gagaccatgggtgatttctggcggatggtgtgggaacagcgtacggccactgtggtcatg
atgacgcggctggaagagaagtcccgggtgaagtgtgatcagtactggccagctcgtggc
actgagacttacggcctcattcaggtgacactgctggacactgtggagctggccacatat
actatgcgcacctttgctctccacaagagtggctctagtgagaagcgtgagctgcgtcag
ttccagttcatggcctggccagaccatggggttcccgagtacccaactcccatcctagcc
ttcctgagacgggtcaaagcctgcaacccgctagatgcagggcctatggtggtacactgc
agtgctggtgtgggccgtactggctgcttcatcgttatcgatgccatgctggaacgaatg
aagcatgaaaagacagttgacatctatggccatgtgacatgcatgagatcgcagagaaac
tatatggtgcagacagaggaccagtatgtgttcatccatgaggcgctgttggaggctgcc
acatgtggacacacagaggtgcctgcccgcaacctctacgcccatatccagaagctgggc
caagtgcctccaggggagagtgtgactgccatggagctcgaattcaagttgctggccagc
tccaaggcccacacatctcgcttcatcagtgccaacctgccctgcaacaagttcaagaac
cgcctggtgaacatcatgccctatgaactgacccgggtgtgtctgcagcccatccgtggt
gtggaaggctctgactatatcaatgccagtttcctggatggctatagacagcagaaggcc
tacatagctacacaggggcctctggcagagagcaccgaggacttctggcgcatgctatgg
gagcacaattccaccatcatcgtcatgctgaccaaacttcgggagatgggcagggagaag
tgccaccagtactggccagcagagcgttctgctcgctaccagtactttgttgtcgacccg
atggctgagtacaacatgccccagtacatcctgcgtgagttcaaagtcacagatgctcgg
gatgggcagtcgaggacaatccggcagttccagttcacagactggccagagcagggtgtt
cccaagacaggagagggcttcatagacttcatcgggcaagtgcacaagaccaaggagcag
tttgggcaggatggtcccatcacagtacactgcagtgctggtgtgggccgcacgggagta
ttcatcactctgagtattgtcctggaacgcatgcgctacgagggtgtggttgacatgttc
cagactgtgaagaccctgcgcacacagcgtcctgcaatggtgcagacagaggaccagtac
cagctgtgctaccgtgcggccctggagtacctcggcagctttgaccactatgcaacgtaa
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