KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101957126
Entry
101957126         CDS       T10664                                 
Symbol
Rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1 isoform X2
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03420  Nucleotide excision repair
iti04066  HIF-1 signaling pathway
iti04110  Cell cycle
iti04114  Oocyte meiosis
iti04120  Ubiquitin mediated proteolysis
iti04141  Protein processing in endoplasmic reticulum
iti04310  Wnt signaling pathway
iti04350  TGF-beta signaling pathway
iti04710  Circadian rhythm
iti05170  Human immunodeficiency virus 1 infection
iti05200  Pathways in cancer
iti05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:iti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101957126 (Rbx1)
   04120 Ubiquitin mediated proteolysis
    101957126 (Rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101957126 (Rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    101957126 (Rbx1)
   04350 TGF-beta signaling pathway
    101957126 (Rbx1)
   04066 HIF-1 signaling pathway
    101957126 (Rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    101957126 (Rbx1)
   04114 Oocyte meiosis
    101957126 (Rbx1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    101957126 (Rbx1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    101957126 (Rbx1)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    101957126 (Rbx1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    101957126 (Rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:iti04121]
    101957126 (Rbx1)
   03400 DNA repair and recombination proteins [BR:iti03400]
    101957126 (Rbx1)
Enzymes [BR:iti01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     101957126 (Rbx1)
Ubiquitin system [BR:iti04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   101957126 (Rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     101957126 (Rbx1)
   Cul2 complex
     101957126 (Rbx1)
   Cul3 complex
     101957126 (Rbx1)
   Cul4 complex
     101957126 (Rbx1)
   Cul7 complex
     101957126 (Rbx1)
   Cul8 complex
     101957126 (Rbx1)
   Cul9 complex
     101957126 (Rbx1)
DNA repair and recombination proteins [BR:iti03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      101957126 (Rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      101957126 (Rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 101957126
NCBI-ProteinID: XP_005322275
UniProt: I3MPZ6
LinkDB
Position
Unknown
AA seq 108 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcagcgatggatgtggataccccgagcggcaccaacagcggcgcgggcaagaag
cgctttgaagtgaaaaagtggaatgcagtagccctctgggcctgggatattgtggttgat
aactgtgccatctgcaggaaccacattatggatctttgcatagagtgtcaagctaaccag
gcatctgctacttccgaagagtgtaccgttgcatggggagtctgtaaccatgcttttcac
ttccactgcatctctcgctggctcaaaacacggcaggtgtgcccattggacaacagagag
tgggaattccaaaagtatggacactag

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