Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101958428
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Entry
101958428 CDS
T10664
Symbol
Traf2
Name
(RefSeq) TNF receptor-associated factor 2 isoform X6
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04010
MAPK signaling pathway
iti04064
NF-kappa B signaling pathway
iti04071
Sphingolipid signaling pathway
iti04137
Mitophagy - animal
iti04141
Protein processing in endoplasmic reticulum
iti04210
Apoptosis
iti04217
Necroptosis
iti04380
Osteoclast differentiation
iti04621
NOD-like receptor signaling pathway
iti04622
RIG-I-like receptor signaling pathway
iti04657
IL-17 signaling pathway
iti04668
TNF signaling pathway
iti04920
Adipocytokine signaling pathway
iti04932
Non-alcoholic fatty liver disease
iti05010
Alzheimer disease
iti05014
Amyotrophic lateral sclerosis
iti05016
Huntington disease
iti05017
Spinocerebellar ataxia
iti05022
Pathways of neurodegeneration - multiple diseases
iti05132
Salmonella infection
iti05135
Yersinia infection
iti05160
Hepatitis C
iti05163
Human cytomegalovirus infection
iti05167
Kaposi sarcoma-associated herpesvirus infection
iti05168
Herpes simplex virus 1 infection
iti05169
Epstein-Barr virus infection
iti05170
Human immunodeficiency virus 1 infection
iti05200
Pathways in cancer
iti05203
Viral carcinogenesis
iti05222
Small cell lung cancer
iti05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101958428 (Traf2)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101958428 (Traf2)
04064 NF-kappa B signaling pathway
101958428 (Traf2)
04668 TNF signaling pathway
101958428 (Traf2)
04071 Sphingolipid signaling pathway
101958428 (Traf2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
101958428 (Traf2)
09143 Cell growth and death
04210 Apoptosis
101958428 (Traf2)
04217 Necroptosis
101958428 (Traf2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101958428 (Traf2)
04622 RIG-I-like receptor signaling pathway
101958428 (Traf2)
04657 IL-17 signaling pathway
101958428 (Traf2)
09152 Endocrine system
04920 Adipocytokine signaling pathway
101958428 (Traf2)
09158 Development and regeneration
04380 Osteoclast differentiation
101958428 (Traf2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101958428 (Traf2)
05203 Viral carcinogenesis
101958428 (Traf2)
09162 Cancer: specific types
05222 Small cell lung cancer
101958428 (Traf2)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
101958428 (Traf2)
05160 Hepatitis C
101958428 (Traf2)
05168 Herpes simplex virus 1 infection
101958428 (Traf2)
05163 Human cytomegalovirus infection
101958428 (Traf2)
05167 Kaposi sarcoma-associated herpesvirus infection
101958428 (Traf2)
05169 Epstein-Barr virus infection
101958428 (Traf2)
09171 Infectious disease: bacterial
05132 Salmonella infection
101958428 (Traf2)
05135 Yersinia infection
101958428 (Traf2)
09164 Neurodegenerative disease
05010 Alzheimer disease
101958428 (Traf2)
05014 Amyotrophic lateral sclerosis
101958428 (Traf2)
05016 Huntington disease
101958428 (Traf2)
05017 Spinocerebellar ataxia
101958428 (Traf2)
05022 Pathways of neurodegeneration - multiple diseases
101958428 (Traf2)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
101958428 (Traf2)
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
101958428 (Traf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101958428 (Traf2)
04121 Ubiquitin system [BR:
iti04121
]
101958428 (Traf2)
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101958428 (Traf2)
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101958428 (Traf2)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
101958428 (Traf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-C3HC4_2
zf-RING_6
zf-RING_4
Sina_ZnF
MATH
PIN_9
Motif
Other DBs
NCBI-GeneID:
101958428
NCBI-ProteinID:
XP_021590005
UniProt:
I3MIJ8
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MAAASVTPPGSLDLLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLTS
ILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVESLPAVCPNDGCTWKGTLKE
YESCHEGLCPFLLTECPACKGLVRLGEKERHVEQECPERNLNCQHCQEPCGHADLEAHHE
VCPKFPLTCEGCGKKKIPREKFHDHVRTCGKCRVPCRFHSVGCPEMMEAEELQEHEAYQL
REHLALVLSSLLEAQTLPGVQNQVGPQLLQRCQTLEQKTTTFENIVCVLNREVERVAVTA
EACSRQHRLDQDKIEALSNKVQQLERSIGLKDLAMADLEQKVLELEASTYDGVFIWKISD
FARKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDA
LLRWPFNQKVTLMLLDQNNREHVIDAFRPDITSSSFQRPVSDMNIASGCPLFCPVSKMEA
KNSYVRDDAIFIKAIVDLTGL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagccagtgtgacaccccctggctctctagatctgctgcagcccggcttctcc
aagaccctcctcgggaccaagctagaggccaagtatttgtgctctgcctgcagaaatgtc
ctacggaggcccttccaggcccagtgtggccatcgctattgctcattctgtctaaccagc
atcctcagctctgggcctcagaattgcgctgcctgtgttcatgagggcatatatgaagaa
ggcatttctattttagaaagcagttcggctttcccagataatgctgcccgcagggaggtg
gagagcctgccggccgtctgtcccaatgatgggtgcacttggaaggggaccctgaaagaa
tatgagagctgccacgaaggactctgccccttcctcctgactgagtgccctgcatgtaaa
ggcctggtccgccttggggagaaggagcgccatgtggaacaggaatgcccagagaggaac
ctgaactgccagcactgccaggagccctgtggccatgctgacctggaggcacaccatgaa
gtctgccccaagttccctttgacctgtgaaggctgtggcaaaaagaagatccctcgggag
aagtttcatgaccacgtcaggacgtgtggcaagtgccgggtcccctgcagattccattct
gttggctgccctgagatgatggaggctgaggagctgcaggagcatgaggcatatcagctg
cgggagcatctggccctggtgctgagctccctcctggaggcacagactctccctggggtc
cagaaccaggtaggaccacagctgctgcagcggtgtcagaccctggagcaaaagacgacc
acctttgagaacatcgtctgtgtcctgaaccgagaggtggagagggtggctgtgactgct
gaggcctgcagccggcaacaccggttagaccaggacaagattgaagccctgagtaacaag
gtgcagcagctggagaggagcattggcctgaaagacctggccatggctgacctggagcag
aaggtcctggagttggaggcatccacctacgatggggtctttatatggaagatctcagac
tttgccaggaagcgccaggaggctgtggctggccgtacacctgccatcttctccccagcc
ttctacaccagcaggtatggctacaagatgtgtcttcgagtctacctgaacggtgatggc
accggaagaggaacacatctgtctctcttctttgtggtgatgaaaggccccaatgatgcc
ctcctgcggtggcccttcaaccagaaggtgacgttgatgctgctggaccagaacaaccgg
gagcacgtgatcgatgccttcaggcccgacataacctcatcctccttccagaggccagtc
agcgacatgaacattgccagtggctgccccctcttctgccctgtgtccaagatggaggcc
aagaattcctacgtgcgagatgatgccatcttcatcaaggccattgtggacctgactggg
ctgtag
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integrated database retrieval system
