Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101958437
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Entry
101958437 CDS
T10664
Symbol
Arhgef1
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X4
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04270
Vascular smooth muscle contraction
iti04611
Platelet activation
iti04810
Regulation of actin cytoskeleton
iti04928
Parathyroid hormone synthesis, secretion and action
iti05135
Yersinia infection
iti05163
Human cytomegalovirus infection
iti05200
Pathways in cancer
iti05205
Proteoglycans in cancer
iti05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
101958437 (Arhgef1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
101958437 (Arhgef1)
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
101958437 (Arhgef1)
09153 Circulatory system
04270 Vascular smooth muscle contraction
101958437 (Arhgef1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101958437 (Arhgef1)
05205 Proteoglycans in cancer
101958437 (Arhgef1)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
101958437 (Arhgef1)
09171 Infectious disease: bacterial
05135 Yersinia infection
101958437 (Arhgef1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
101958437 (Arhgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101958437 (Arhgef1)
Membrane trafficking [BR:
iti04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101958437 (Arhgef1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
SOS1_NGEF_PH
SET_assoc
Motif
Other DBs
NCBI-GeneID:
101958437
NCBI-ProteinID:
XP_013219654
LinkDB
All DBs
Position
Unknown
AA seq
912 aa
AA seq
DB search
MEDVARGVAPGPPRPGLVPVSIIGAEDEDFENELEASSEEQNSQFQSLEQVKRRPAHLMA
FLQHVALQFEPGPLLCCLHADMLGSLGPKETKKAFLDFCHSFLDKTAVLRVPAPSSVTFE
LDRTRPDLLSEDVQRRFMQEVVQNQQATVSRQLEDFRSKRLMGMTPWEQELAQLEAWVGR
DRASYEARERHVAERLLTHLEEMQHTISNDEEKSAAVVTAISLYMRHLGVRTKSGDKKSG
RNFFRKKMMGNKRSDEPPKTKKGLSSILDAARWNRGEPQAPDFRHLKSEVDAEKLGPTDR
KGALGMPSRDRNVGTSGQDTPGVPLQLLSGDSPDREPGVDSPLDLGDPPPQGTVNLEPPA
PPESTEEGAETESPEPGDEGEPGRSGLELEPEEPPGWRELVPPDILLNLPKSQVKRQEVI
SELLVTEAAHVRMLRVLHDLFYQPMADGGFFPLEELQNIFPSLDELIEVHSLFLDRLMKR
RQESGYLIEEIGDVLLARFDGAEGSWFQKISSRFCSRQSFALEQLKAKQRKEPRFCTFVQ
DAESRPRCRRLQLKDMIPTEMQRLTKYPLLLQSIEQNTEEPTEREKVELAAECCREILHH
VNQAVRDMEDLLRLKDYQRRLDLSHLRQSSDPMLSEFKNLDITKKKLVHEGPLTWRVTKD
KAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATD
HKAFYVIFTWDQEAQIYELVAQTVSERKNWCALITETAGSLKVPAPASRPKPRPSPSSTR
EPLLSSSENGNCSREMPPADARTEKILSDLLPFCRPGPEGQLAATALQKVLSLKQLLFPV
EEDNNGAGPPRNGDEVPGGSPLGPAQTQEIQENLLSLEEAIKQLEELEEELCRLRPLLSQ
LGGNAVPQPGCT
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgtcgcccgaggggtggctccagggcccccgcggcctggcctggtgcccgtc
agcatcatcggggctgaggatgaggatttcgagaatgagctggaggctagctcagaggag
caaaacagccagttccagagcctggagcaggtgaagaggcgcccggcccacctcatggct
ttcctgcagcatgtggccctgcagtttgagccaggacctctgctctgctgcctgcatgcc
gacatgctgggctccctgggccccaaggagaccaagaaggccttcctcgacttctgccac
agcttcttggataagaccgcggtcctacgggtgccagccccttccagcgtcacctttgaa
cttgaccgcacacggcctgacctcctctctgaggatgtccagcggcggttcatgcaggag
gtggtgcagaaccagcaggcaaccgtgagcaggcagctggaggacttccgctccaagcgg
ctcatgggcatgacgccctgggagcaggagctagcccagctggaggcctgggttgggcgc
gaccgagccagctacgaggcccgtgagcggcatgtggccgagcgactgctgacccacctg
gaggagatgcagcacaccatctctaacgacgaagagaagagtgctgctgtggtgactgcc
atcagcctgtacatgcgccaccttggggtgcggaccaagagcggggacaagaagtcaggg
aggaacttcttccggaaaaagatgatggggaacaagcggtcagatgagcctcctaagacc
aagaaaggactgagcagtatcctggatgctgctcgctggaaccggggagagccccaggct
ccagattttcgacacctcaaaagcgaggttgatgctgaaaagctaggtcctacagaccgg
aagggagccctgggaatgccttctcgggaccggaatgttgggacttctggacaggacacc
cctggagtccctctgcaacttttgtccggagacagcccagaccgggaaccaggcgtggat
tcccccctggacctgggggacccacccccacagggcacagtgaatttggagcccccggcg
cccccagagagcacagaggagggtgctgagacggagagccctgagcctggagatgaaggg
gagccagggcggtcaggactagagctggaaccagaagagcctcccggctggcgggagctt
gtccccccggacatcctcctcaacctgcccaaaagccaggtgaagcggcaggaggtcatc
agcgagctcctggtgacagaggcagcccatgtgcgcatgctgcgggtgttgcatgacctc
ttctaccagcccatggccgatgggggcttcttcccgctggaggaactgcagaacatcttc
cccagcctggatgagctcatcgaggtgcactccctgttcctcgatcgcctcatgaaacgg
agacaggaaagtggctacctcattgaagagattggagacgtgctgttggccaggtttgat
ggtgccgagggctcctggttccagaaaatctcctcccgcttctgcagccgccagtcattt
gctttagagcagctcaaggccaaacagcgcaaggagccccgattctgtaccttcgtgcag
gatgctgagagccgcccacggtgccgccgcctgcaactgaaggacatgatccccaccgag
atgcagcggctgactaagtacccgctgctcctgcagagcatcgagcagaacacagaagag
cctacggaacgggagaaagtggagctggcagccgagtgctgccgggagattctgcaccat
gtcaaccaagccgtgcgtgacatggaggacttgctgaggctcaaagattaccagcgccgc
ctggacttgtcccacctgcggcagagcagcgaccccatgctgagcgagttcaagaacctg
gacatcaccaagaagaagctggtgcacgagggtccattgacgtggcgggtgaccaaggac
aaagctgtggaggtccacgtgctgctgctggacgacctactactactgctccagcgccag
gatgagaggctgctgctcaagtcacacagccggacgctcacgcccacgcctgatggcaag
accatgctgcggcctgtgctgcggctcacctccgccatgacccgcgaggtggccaccgat
cacaaagccttctacgtcatttttacctgggaccaagaggcccaaatatatgagctggtg
gcacagactgtgtcagagcggaagaactggtgtgccctcattactgagactgctggatcc
ctgaaggtccccgcccctgcctcccgccctaaaccccgacccagcccaagcagcacccgg
gaacccctgctcagcagctctgagaatggcaactgcagccgagagatgcctccagctgac
gcccggactgagaaaatcctcagtgacctcctgcccttctgccgaccaggccctgagggc
cagcttgctgccacagcccttcagaaagtgctgtccctgaagcagctcctgtttcctgtg
gaggaagacaacaacggggctgggcctcctcgaaacggggatgaggtgccaggtggcagc
cctctgggcccagcgcagacccaggaaattcaagagaacctgctcagcctggaagaggcc
ataaagcagctagaggaattggaggaggaactgtgccgcctgcgacctctcctgtctcag
ctcggggggaatgctgtcccccagcctggctgcacctga
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integrated database retrieval system
