Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101958777
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Entry
101958777 CDS
T10664
Symbol
Plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04140
Autophagy - animal
iti05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101958777 (Plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101958777 (Plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101958777 (Plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
iti04990
]
101958777 (Plekhm1)
Membrane trafficking [BR:
iti04131
]
SNARE
SNARE associated proteins
Others
101958777 (Plekhm1)
Domain-containing proteins not elsewhere classified [BR:
iti04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
101958777 (Plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
OapC
Motif
Other DBs
NCBI-GeneID:
101958777
NCBI-ProteinID:
XP_005328201
UniProt:
I3N696
LinkDB
All DBs
Position
Unknown
AA seq
1061 aa
AA seq
DB search
MLSVVENGLDPRAAIPVIKKKLVGSVKALQKQYVSLDTVVTSEDGDANTMCSALEAVFIH
GLHAKHIRAEAGGKRKKSAHQKPLPQPVFWPLLKAVTHKHIISELEHLVFVNTDVGRCRA
WLRLALNDGLMECYLKLLLQEQARLCEYYQPTALLRDAEEGEFLLSFLQGLTSLSFELSY
KSAILNEWTLTPLALSGLCPLSELDPLTTSGAELQRKESLDSISHSSGSEDIEVQHSGHK
IRRNRKLTASSLSLDTASSSQLSCSLNSDSCLLQENGFKSPDRSEDPMSYDSDLGTANAD
DSDPSLQEVLSEFSKAQVNSVPTNGLSQKTEIPTLQASLSLATRTHLDFDMPAESLAAQA
SSGSPDGGHKQESFSQASDIPDVQQPDVAQAEPMGSTSDQQPSSATKETDTAVSHRSAQQ
KALEDGTVGLKLVVSSPTSPKSRNWISEDDFYRPTQEQAPESTTDGSGAGFRGTPESRPA
LHRHFSQGPRKSCSLGALDKACVPSPGSRKARAAPAPEHKNFRVVHRRQMGLSNPFRGLM
KLGTVARRGAMGIWKEFFCELSPLELRLYLSDEERTCVESCSLLRCEAVGPAHSDGRFEL
VFSGKKLALRASSQDEAEDWLDRVREALQKVRPQQEDEWVNIQYPDQPEDPAEAPLGGHL
SYSALLPEPTVPQGTQFDWTSAQVPEPDAIKESLLYLYADRTWIPYIFSLSLESLKCFRV
KNNEKMLSDSHGVETIRDILPDTSLGGPAFFKIITAKAVLKLQAGTAEEAALWRDLVRKV
LASYLETAEEAVTLGGSLDENSQEVLKFATRENGFLLQYLVAIPTEKGLDSQGCFCAGCS
RQIGFSFVRPKLCAFSGLYYCDICHQDDTSVIPARIIHNWDLTKRPVCRQALKFLAQIRA
QPLVNLQLVNASLYEHVEQMRLIGRNREQLKLLGDYLGLCRSGALKELSKRLNHRNYLLE
SPHKFSVADLQQIADGVYEGFLKALIEFASQHVYHCDLCTQRGFICQICHHHDIIFPFEF
DTTIRCAECKTVFHQSCQAVVKKGCPRCARRRKYQEQNTLT
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgctctcagtggtggagaatggactggacccccgggctgccatcccggtcatcaagaag
aagctggtgggttctgtgaaggcattgcagaagcagtatgtgtccctggacacagtggtc
actagtgaagatggagatgccaacaccatgtgcagtgccttggaggctgtgtttatccat
ggcctccatgccaagcacatccgcgcggaggctggagggaaaaggaagaaaagtgcccac
cagaagcctctgcctcagcctgtcttctggcccctcctgaaagctgtcacccacaaacac
atcatctcagaattggagcacctggtcttcgtcaacacagatgtgggccgctgccgggcc
tggctgcggctggccctcaacgacggcctgatggagtgctacctgaaactgctgctgcag
gagcaggcccgactgtgcgagtactatcagcccacagccctgcttcgagacgctgaggag
ggcgagttcctccttagtttcctgcagggactaacatccttgtcctttgaactgtcctat
aaatctgccatcttaaatgaatggacactcaccccattggccctctctgggctttgccca
ctctctgagcttgaccctctcactacctctggtgcagaactacagcggaaggagtctctg
gattcaatttctcattcctcaggctcagaggacatcgaagtccagcactcgggtcataag
atccggcggaataggaagctcactgcctcctccctcagcctggatacagccagttcatcc
cagctgtcctgcagcctaaactccgatagctgcctacttcaagagaatggcttcaagagt
ccagaccgttctgaggatcccatgtcctacgattcagacttgggcacagcaaatgctgat
gattccgacccgtctctacaagaggtattgtcagaattcagcaaagcccaggtaaactct
gtaccaaccaacggactaagccaaaagacggagatccccacgctacaggcctcactctcc
ctggccacgcgtacacacctggactttgatatgcctgcagaatcccttgctgcccaagca
tcttctgggagcccagatggtggtcacaagcaggaatcattttcccaggcatctgacatc
ccagatgtgcagcaaccagatgttgcccaagctgaacctatggggagcacttcagaccag
cagccctctagtgctacgaaagagacagacacagcagtcagccacaggagtgcccagcag
aaggccctggaggatggtacggttggactgaagcttgtggtttcctcccccaccagcccg
aaaagcagaaactggatctctgaagatgacttctaccggcctacccaggagcaagcccct
gagagcaccacagatggttccggagctggttttcgagggactccagagtcaaggcctgct
ctccacaggcatttttctcaaggaccaagaaagagctgctccctgggggcattagacaaa
gcatgtgtgccttccccaggaagcaggaaagccagggcagcaccagctccggagcataag
aacttccgggtggtgcaccgcaggcagatggggctgtccaacccattccggggcctcatg
aagctaggcacagtggctcggcgaggggccatgggcatctggaaggagttcttctgcgag
ctttccccgctggagctccgcctttacctgagtgatgaggagcgcacctgtgtggaaagc
tgctctctgctgcgctgtgaggcagtggggccagcccatagtgatgggcgctttgagcta
gtcttctctggcaagaagctggccctgcgtgcctcctctcaggatgaggctgaggactgg
cttgaccgggtgcgggaggccctgcagaaggtccggcctcagcaggaggacgagtgggtg
aacatccagtatccagaccaacctgaggaccccgctgaggctcccctaggtggacacctc
tcttactcagccttgcttccggagcccacagtcccccagggcacacagtttgactggaca
tctgcccaggttccggagccagatgctatcaaagaatcccttctgtacctgtatgcggac
aggacctggataccctatattttttccctgtctttggagtctcttaaatgcttccgagtg
aaaaacaatgagaagatgctaagtgacagccatggagtggagaccatccgagacatccta
ccggacacaagcctagggggcccggcctttttcaaaatcatcacagccaaggccgtgctg
aagctgcaggcagggaccgccgaggaggctgccctgtggagagacctggtccgcaaggtc
ttggcatcatacctagagacagctgaggaggccgtgacacttggcgggagtctggatgaa
aactctcaggaggtgctgaagttcgccacccgggagaatggcttcctgttgcagtacctg
gtggccatccccacggagaaaggcctggactcccagggctgcttctgcgcaggctgctcc
cggcagattggcttctcctttgtacgacccaaactctgtgccttctctggcctctattac
tgtgacatctgccaccaagatgatacttcagtgattccggccagaattatccacaactgg
gacctcaccaagcgcccggtctgtcggcaggccctgaagtttctggcgcagatccgggcc
cagcccctagtcaacctgcagctggtgaatgcctctctgtacgagcatgtggagcagatg
cgcctcattggcaggaaccgggaacaactgaagcttctgggggattacctgggcctatgt
cgaagtggtgccctgaaggagctgagcaagaggctcaaccataggaattatctcttggag
tctccccacaagttcagtgtcgctgacctccagcagattgcagatggggtgtacgaaggg
ttcctcaaggccctgatcgagtttgcctcgcagcatgtctaccactgtgacctgtgcacg
cagcggggctttatttgccagatctgccaccaccatgacatcatcttcccctttgagttt
gacaccacaatcaggtgtgctgagtgcaagaccgtcttccaccagagctgccaggctgtg
gtgaagaagggctgcccccgctgtgcccgccggcgcaaataccaggaacagaacactcta
acctag
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integrated database retrieval system
