Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101960048
Help
Entry
101960048 CDS
T10664
Symbol
Fbn1
Name
(RefSeq) fibrillin-1
KO
K06825
fibrillin 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04350
TGF-beta signaling pathway
iti04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
101960048 (Fbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101960048 (Fbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
iti00536
]
101960048 (Fbn1)
Glycosaminoglycan binding proteins [BR:
iti00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101960048 (Fbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
TB
hEGF
EGF
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
Motif
Other DBs
NCBI-GeneID:
101960048
NCBI-ProteinID:
XP_040131322
LinkDB
All DBs
Position
Unknown
AA seq
2715 aa
AA seq
DB search
MRREGLLEIALGFTVLLASYTSHGADANLEAGNVKETRATRAKRRGGGGLDALKGPNVCG
SRYNAYCCPGWKTLPGGNQCIVPICRHSCGDGFCSRPNMCTCPSGQISPSCGSRSIQHCT
IRCMNGGSCSDDHCLCQKGYIGTHCGQPVCESGCLNGGRCVAPNRCACTYGFTGPQCERD
YRTGPCFTVVSNQMCQGQLSGIVCTKTLCCATVGRAWGHPCEMCPAQPHPCRRGFIPNIR
TGACQDVDECQAIPGLCQGGNCINTVGSFECKCPAGHKFNEVSQKCEDIDECSTIPGVCD
GGECTNTVSSYFCKCPPGFYTSPDGTRCVDVRPGYCYTALANGRCSNQLPQSITKMQCCC
DVGRCWSPGVTVAPEMCPIRATEDFNKLCSVPMVIPGRPEYPLPPVGPVPPAQPVPPGFP
PGPPHVVLRPPEYPYPSREPPRVLPFNVTDYCQLVRYLCQNGRCIPTPGSYRCECNKGFQ
LDLRGECIDVDECEKNPCVGGECINNQGSYTCHCRAGYQSTLTRTECRDIDECLQNGRIC
NNGRCINTDGSFHCVCNAGFHVTRDGKNCEDMDECSIRNMCLNGMCINEDGSFKCICKPG
FQLASDGRYCKDINECETPGICMNGRCVNTDGSYRCECFPGLAVGLDGRVCVDTHMRSTC
YGGYKRGQCVKPLFGAVTKSECCCANTEYAFGEPCQPCPAQNSAEYQALCSSGPGMTSAG
SDINECALDPDICPNGICENLRGSYKCICNSGYEVDITGKNCVDINECVLNSLLCDNGQC
RNTPGSFVCTCPKGFIYKPDLKTCEDIDECESSPCINGVCKNSPGSFICECSSESTLDPT
KTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWGSPCTICQVDPICGKGFS
RIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPNGMTLDATGRICLDIRLETCYLR
YDDEECTLPIAGRHRMDACCCSVGGAWGTEECEECPMRNTPEYEELCPRGPGFATKDITN
GKPFFKDINECKMIPSLCTHGKCRNTIGSFKCRCDSGFALDSEERNCTDIDECRISPDLC
GRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGACLNTEGSYRCECP
PGHQLSPNISACIDINECELSGNLCPNGRCVNLIGKYQCACNPGYHSTPDRLFCVDIDEC
SIMNGGCETFCTNSEGSYECSCQPGFALMPDQRSCTDIDECEDNPNICDGGQCTNIPGEY
RCLCYDGFMASEDMKTCVDVNECDLNPNICLSGTCENTKGSFICHCDMGYSGKKGKTGCT
GVGFFNKIKSGDLRKHDLCFFLPIDLDECSENLNLCGNGQCLNAPGGYRCECDMGFVPSA
DGKACEDIDECSLPNICVFGTCHNLPGLFRCECEIGYELDRSGGNCTDVNECLDPTTCIS
GNCINTPGSYTCDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSK
ASCCCSLGRAWGTPCELCPPVNTTEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG
GKCINTFGSFQCRCPTGYYLNEDTRVCDDVNECDTPGICGPGTCYNTVGNYTCICPPDYM
QVNGGNNCMDMRRSLCYRNYYADNQTCDGELLFNMTKKMCCCSYNIGRAWNKPCEQCPIP
STDEFATLCGSQRPGFVIDIYTGLPVDIDECREIPGVCENGVCINMVGSFRCECPVGFFY
NDKLLVCEDIDECQNGPVCQRSAECINTAGSYRCDCKPGYRLTPTGQCNDRNECQEIPNI
CSHGQCIDTVGSFYCLCHTGFKTNADQTMCLGKYVIIISFFSHLIGNLFLTRVILLDIDE
CVEEPEICALGTCSNTEGSFKCLCPEGFSLSSTGRRCQDLRMSYCYAKFEGGKCSSPKSR
NHSKQECCCALKGEGWGDPCELCPTEPDEAFRQICPYGSGIIVGPDDSAVDMDECKEPDV
CKHGQCINTDGSYRCECPFGYILEGNECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGF
EPGPMMTCEDINECAQNPLLCAFRCVNTYGSYECKCPAGYVLREDKRMCKDEDECEEGKH
ECTEKQMQCKNLIGTYMCICGPGYQRRPDGEGCVDENECQTKPGICENGRCLNTLGSYTC
ECNDGFTPSPTQDECLDNREGYCFTEVLQNMCQIGSSNRNPVTKSECCCDGGRGWGPHCE
ICPFQGTVAFKKLCPHGRGFMTNGADIDECKVIHDVCRNGECVNDRGSYHCICKTGYTPD
ITGTSCVDLNECNQAPKPCNFICKNTEGSYQCSCPKGYILQEDGRSCKDLDECATKQHNC
QFLCVNTIGGFTCKCPPGFTQHHTACIDNNECTSDINLCGSKGICQNTPGSFTCECQRGF
SLDQSGASCEDVDECEGNHRCQHGCQNIIGGYRCSCPQGYLQHYQWNQCVDENECLSAHI
CGGASCHNTLGSYKCMCPAGFQYEQFSGGCQDINECGSSQAPCSYGCSNTEGGYLCGCPP
GYFRIGQGHCVSGMGMDRGGSDAPVSGEMDDNSLSPEACYECKINGYPKRGRKRRSANET
DASNIKDLSETEANVSLASWDVEKTATFAFNISHVSNKVRILELLPALTTLTNHNRYLIE
SGNEDGFFKINQKEGISYLHFTKKKPVAGTYSLQISSTPLYRKKELDQLQDRHDKDYLSG
ELGDNLKMKIQILLH
NT seq
8148 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgagaggggctgctggagatcgccctgggatttaccgtgctcttagcgtcctac
acgagccatggggcggatgccaatttggaggctggaaacgtgaaggaaaccagagccacc
cgggccaagaggcgaggcggcggaggactcgacgcgcttaagggacctaatgtatgtgga
tcacgttataatgcttattgttgtcctggatggaaaaccttacctggtggaaatcagtgt
attgtccccatttgccggcattcctgtggggatggattttgttcgaggccaaatatgtgc
acttgcccatctggtcagatatctccttcctgtggctccagatctatacaacactgcact
attcgctgtatgaatggaggcagctgcagtgatgatcattgtctgtgccagaaaggatac
ataggaactcactgtggacaacctgtctgtgaaagtggctgtctcaatggagggaggtgt
gtggccccaaatcgatgtgcatgcacttacggctttactggaccccagtgtgaaagagat
tacagaacaggcccatgtttcactgtggtcagcaaccagatgtgccagggacagctcagc
gggattgtctgcacaaaaaccctctgctgtgccacggtcggccgagcctggggccacccc
tgtgagatgtgtcctgcccaacctcacccttgccgccggggcttcattccaaacatccgc
acaggagcgtgtcaagatgtggatgaatgccaggccatccctgggctctgtcaaggagga
aattgcattaatactgttgggtcttttgagtgcaaatgccccgctggacacaaatttaat
gaagtgtcacaaaaatgtgaagatattgatgaatgcagcactatccctggagtctgcgat
gggggtgaatgtacaaacacagtcagcagttacttttgcaaatgtccccctggcttttac
acctctcctgatggtaccagatgtgtagatgttcgcccaggatactgttacacggctctg
gcaaatgggcgctgttctaaccagctgccacagtccataaccaaaatgcagtgctgctgt
gatgtcggccgatgctggtccccgggggtcactgtcgcccctgagatgtgtcccatcaga
gcaacagaggatttcaacaagctttgctctgtcccaatggtaattcctgggagaccagaa
tatcctcttccacccgttggccccgttcctccagctcaacctgttcctcctggctttcct
cctggacctccacatgtagtcctcaggccaccagaatatccatatccatctcgggagcca
ccaagggtgctaccattcaatgtcactgattactgtcagctggtccgctatctatgtcaa
aacgggcgctgcattccaactcctgggagctatcggtgtgagtgcaacaaaggattccag
ctggacctgcggggggagtgcattgatgttgatgaatgtgaaaaaaatccttgtgttggt
ggagaatgtattaataaccaaggctcatacacctgccactgccgagctggctatcagagc
acactcaccaggacggagtgccgagacattgatgaatgtttacagaatggccggatctgc
aataatggacgttgcatcaacacagatggcagtttccattgtgtgtgtaatgcaggcttc
catgttacccgagatgggaaaaactgtgaagatatggatgagtgcagcatacggaacatg
tgtcttaacgggatgtgtatcaatgaagatggcagtttcaaatgcatttgcaaacctgga
ttccagctggcatcagatgggcgttactgcaaagatattaacgagtgtgaaacacctggg
atctgcatgaatgggcgctgcgtgaacactgatggctcctacagatgtgaatgcttccct
ggactggctgtgggtctggatggacgtgtgtgtgttgacacacacatgcggagcacatgc
tacggaggatacaagcggggccagtgtgtcaagcctttgtttggtgctgttactaaatct
gaatgctgttgtgccaacactgagtatgcctttggggagccctgccagccatgtcctgcc
cagaattcagcggaatatcaggcactctgcagcagtgggccaggaatgacgtcagcaggc
agtgatataaatgaatgtgcattagatcctgatatttgcccaaatggaatttgtgaaaat
ctccgtgggtcctacaagtgtatatgcaattcgggatatgaagtggatataactggaaaa
aactgtgttgatattaacgaatgtgtgctgaacagcctactctgtgacaacggacagtgt
agaaacactcctggaagttttgtctgtacctgccccaagggatttatatataaacctgac
ctgaaaacctgtgaagacattgatgaatgtgaatcaagtccttgcattaatggagtctgc
aagaacagtcctggctctttcatttgtgaatgttcttctgaaagtactttggatccaaca
aaaaccatctgcatagaaaccatcaagggcacttgctggcaaacagtcatcgatgggcgg
tgtgagatcaacatcaatggagccaccttgaagtcccagtgctgctcttccctcggtgct
gcctgggggagcccgtgcaccatatgccaagttgatcccatatgtggtaaaggcttctca
agaattaaaggaacacagtgtgaagatatagacgaatgtgaagtgttcccaggagtgtgc
aaaaatggcctgtgtgtcaacaccaggggatcgttcaagtgtcagtgtcccaatggaatg
actttggatgccacaggaaggatctgccttgatatccgcctggaaacatgctacctgagg
tatgatgatgaggagtgcactctgcctattgctggacgccaccgcatggatgcctgctgc
tgctctgtaggtggagcctggggcacggaggagtgtgaggagtgtcccatgagaaacacc
ccagagtatgaggagctctgccccagaggaccaggatttgccacgaaagatattacaaat
ggaaaacctttcttcaaagatatcaatgagtgcaagatgatacccagcctctgtacccac
ggcaagtgcagaaataccattggcagctttaagtgcaggtgtgacagtggctttgctctt
gattctgaagaaaggaactgcacagatattgatgaatgccgcatatctcccgacctctgt
ggccgaggccagtgtgtgaacaccccaggggactttgaatgcaagtgtgatgaaggctat
gagagtggattcatgatgatgaagaactgcatggatattgatgagtgtcagagagatcct
ctcctctgccgaggcggtgcttgccttaacacagaaggcagttaccgctgcgaatgccca
cctggtcatcagctgtccccaaacatctctgcatgtattgacatcaatgagtgtgaactg
agcgggaacctctgtcccaatggccgctgtgtgaacctcatagggaagtatcagtgtgcc
tgcaaccctggctatcattcaacgcccgataggctgttttgtgttgacattgatgaatgc
agcataatgaatggtggatgtgaaaccttctgcacaaactctgaaggcagctatgagtgt
agctgtcagccaggatttgcactaatgcctgaccagagatcttgcactgacatcgatgaa
tgtgaagataaccccaatatctgtgatggtggtcagtgtacaaacattcctggagaatac
aggtgcttgtgctatgatggatttatggcttctgaagatatgaagacttgtgtagatgtc
aatgagtgtgacctgaatccgaatatctgcctaagtgggacctgtgaaaacactaaaggc
tcattcatctgtcactgtgatatgggctattcaggcaaaaaagggaaaaccggctgtaca
ggtgtgggttttttcaataaaataaaaagtggagatctgagaaagcatgacttgtgcttc
tttctgcctatagaccttgatgagtgctccgagaacctgaatctctgtgggaatggccag
tgcctcaatgcccctggagggtaccgctgtgaatgtgacatgggcttcgtgcccagtgcc
gacggaaaggcctgcgaagatattgatgagtgctcccttccaaacatctgtgtctttgga
acttgccacaaccttcctggcctgttccgctgcgagtgtgagataggctatgaactggac
agaagtggtggaaactgcacagatgttaatgagtgtctggatccaaccacgtgtatcagt
gggaactgtatcaacactccgggcagctatacctgtgactgtccacctgattttgagctg
aatccaactcgagttggctgtgttgatacccgctcaggaaattgctatttggatattcgg
ccccgtggagacaacggagatacagcctgtagcaatgaaatcggagttggtgtttccaag
gcttcctgctgctgttctctgggtagagcctggggtactccctgtgagctgtgccctcct
gtgaacacaactgagtacaaaattctgtgccctggaggagaaggctttcgcccaaaccct
atcaccgtaatactggaagacattgatgagtgccaggagctgccagggctgtgccaaggg
ggaaagtgtatcaacactttcggcagtttccagtgccgctgtccaacgggctactacctg
aacgaggacacccgagtgtgtgatgatgtgaatgaatgtgacactcctggaatctgtggc
ccagggacatgttacaacaccgttggcaactacacctgtatttgtcctccagattacatg
caagtgaatgggggaaataattgcatggatatgagaagaagtttgtgctacagaaactat
tatgctgacaaccagacctgtgatggagagctcttattcaatatgaccaagaagatgtgc
tgctgctcttacaacattggccgagcctggaataagccctgtgaacagtgtcccatccca
agcacagatgaatttgctacgctctgtggaagccagaggccaggctttgtcatcgatatt
tataccggcttacccgtagatattgatgaatgccgggaaatcccaggagtctgtgaaaat
ggtgtgtgcatcaacatggttggcagcttcagatgtgaatgtccagtggggttcttctat
aatgacaagttgttggtttgtgaagatattgacgagtgtcagaacggccccgtgtgccag
cgcagtgccgagtgcatcaacactgcaggcagctaccgctgcgactgtaagcccggctat
cgcctcacgcccacaggacagtgcaatgatcgcaatgaatgtcaagaaatccccaatata
tgcagccatggacagtgtattgacactgtgggaagcttctactgcctttgccatactggt
ttcaaaacaaatgctgatcaaaccatgtgtttgggtaagtatgtgattatcatttcattt
ttttcacatcttattggaaatttatttttgacacgtgtaattcttttagatattgatgag
tgtgtggaggagccagaaatctgtgccttgggaacatgcagtaacactgaaggcagcttc
aaatgtctgtgtccagaagggttctccttgtcctctactggaagacgatgccaagatttg
cgaatgagctactgttatgccaagtttgaaggaggaaagtgttcatcccccaaatccaga
aatcactccaaacaggaatgctgctgtgccttgaagggagaaggctggggagatccctgt
gagctgtgtcccacagagcctgatgaggctttccgccagatctgtccttatggaagtggg
atcattgtgggacctgatgattcagcagttgatatggatgagtgcaaagaacctgatgtc
tgtaaacacgggcagtgtatcaacacagatggctcctatcgctgcgagtgtccctttggt
tatattctagaaggcaatgaatgtgtggataccgatgaatgttctgtgggcaatccctgt
ggaaatggaacctgcaagaatgtgattggaggatttgagtgtacctgtgaggaaggattt
gagcctggtccaatgatgacatgtgaagatataaatgaatgtgcccagaatcctctgctc
tgtgccttccgatgtgtgaacacttatgggtcctatgaatgcaaatgtcccgctggatat
gttttgagagaagacaagaggatgtgcaaagatgaggatgaatgtgaagagggaaaacat
gaatgtactgaaaagcaaatgcaatgcaagaacctcattggcacatatatgtgcatctgc
ggacctgggtaccagcggagacctgatggagaaggctgtgtcgatgagaacgagtgtcag
accaagccagggatctgtgagaacgggcgctgcctcaacactctggggagctacacctgc
gagtgcaatgacgggttcacccccagccccacccaagatgagtgcctggacaaccgggaa
gggtactgcttcacagaggtgctgcaaaacatgtgtcagatcggctcgagcaacaggaac
cctgtcaccaagtctgagtgctgctgtgacggaggcagaggttggggtccccactgtgag
atctgccctttccagggcaccgtggctttcaagaaactctgcccccatggccgaggattc
atgaccaatggagcagatattgatgaatgcaaggttattcatgatgtttgccgaaatgga
gaatgtgtcaatgacagaggatcatatcactgtatctgtaaaactggctatactccagat
ataactgggacttcctgtgtcgatctgaacgagtgcaaccaggctcccaaaccatgcaat
tttatctgcaaaaacacagaagggagttaccagtgttcctgtccgaaaggctacattctg
caagaggatggaagaagctgcaaagatcttgatgagtgtgctactaagcagcacaactgc
cagttcctgtgtgttaacaccattggtggcttcacttgtaaatgtcctcctggatttacc
cagcaccacactgcctgcattgataacaatgaatgcacctctgacatcaacctgtgtggc
tctaagggcatttgccagaacactcctggaagcttcacctgtgaatgccagcggggattc
tcccttgaccagagtggtgccagctgtgaagatgtggatgagtgtgaaggcaaccatcgc
tgccagcacggctgccagaacatcattggaggctataggtgcagctgtccccagggctac
cttcagcactaccagtggaaccagtgtgtcgatgaaaacgaatgcctcagtgctcacatc
tgcggaggagcctcctgtcacaacaccctgggaagctacaagtgcatgtgtcctgctggc
ttccagtacgaacagttcagtgggggctgccaagacatcaatgaatgtggctcctcacag
gctccctgcagttatggctgctctaacaccgagggtggctacttgtgtggctgtccacct
ggttacttccgaataggccaagggcactgtgtttctggaatgggaatggaccgaggaggc
tcagatgcacctgtcagtggtgaaatggatgacaattcactttccccagaggcttgctat
gagtgtaagatcaatggctaccccaaacgaggcaggaaacgaagaagtgctaatgaaaca
gatgcctccaatatcaaggatctgtctgaaacagaagccaacgtgagtcttgcaagttgg
gatgttgagaagacagccacctttgctttcaatatttcccatgtcagtaataaggtccga
atcctagaactccttccagccctcacaactctgacgaatcacaatagatacttgattgag
tctggaaatgaagatggcttctttaaaatcaaccaaaaggaagggatcagctacctccac
tttaccaagaagaagccagtggctggaacctactcgttacaaatcagtagtactcctctt
tacagaaagaaagaacttgaccagctacaagacagacatgacaaagactacctcagtggt
gaactgggtgataatctgaagatgaaaattcagattttgcttcattaa
DBGET
integrated database retrieval system
