Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961262
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Entry
101961262 CDS
T10664
Symbol
Prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00310
Lysine degradation
iti01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
101961262 (Prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iti03000
]
101961262 (Prdm6)
03036 Chromosome and associated proteins [BR:
iti03036
]
101961262 (Prdm6)
Enzymes [BR:
iti01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
101961262 (Prdm6)
Transcription factors [BR:
iti03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
101961262 (Prdm6)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
101961262 (Prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
101961262
NCBI-ProteinID:
XP_005330937
UniProt:
I3M7W1
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPHGGGGGPLKGSGAAGPLGAPQPLQPPPPPPPP
PPPPQERSEPPPDSRRPRPASLSSASSTPASSSTSASSASSCAAAAAAAAAAALAGLSAL
PVAQLPVFAPLAAATVATEPLPPKDLCLGAISGSGLSKCGGGSGDSRGVPRFRCSAEELD
YYLYGQQRMEIIPLNQHTSDPNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSAAAAAPP
PELPEWLRDLPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQAGAVRN
TQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRACIDI
PRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDTLQPFNKSSKLSPAT
QQRSVVFPQTPCSRNFSLLDKSGPIESGFNQINVKNQRVLASPTSTSQLHSEFSDWHLWK
CGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYC
GRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEV
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccgggagaccccggcggctcggccttcctcaaagtggacccagcctacctg
cagcactggcagcaactcttccctcatggaggcggcggcggcccgctcaaaggcagcggg
gccgctggtcctctgggcgcgcctcaacccctgcagccaccgccgccgccgccgccgccg
ccaccacccccgcaggagcgctccgagcctccgccggacagccggcgtccgcggccggct
tcgctttcctcggcttcgtccaccccggcttcctcctccacctcagcctcttctgcctcc
tcctgcgctgctgccgcggcagccgccgccgccgccgcgctggcgggtctctcggctctg
ccagtggcgcagctgccggtgttcgcgcctctagccgccgccaccgtggccacggagccg
ctgcccccaaaagacttgtgcctcggcgctatctcgggctcagggctctccaagtgcggc
ggcggcagcggggatagccggggcgtcccgcgcttccgctgcagcgccgaggagctggac
tattacctgtatggccagcagcgcatggagatcatcccactcaaccagcacaccagcgac
cccaacaaccgttgcgatatgtgcgcggacaaccgcaatggcgagtgccccatgcacggc
ccgctgcactcgctgcgccggcttgtgggcaccagcagcgccgcggccgccgcacctcca
ccggagctgcctgagtggcttcgggacctgccaagggaggtgtgcttgtgcaccagtact
gtgccgggcctggcgtatggcatctgtgcggcacaaaggatacaacagggtacctggatt
gggccattccagggcgtgctcctgcccccggagaaggtgcaggcgggcgccgtgaggaac
acgcagcatctctgggagatatatgatcaagatgggacactacagcactttattgatggt
ggggaacctagtaagtcgagctggatgaggtatatccgatgtgcaaggcactgcggagaa
cagaatctaacagtagttcagtacaggtcgaatatattctaccgagcctgtatagatatc
cctaggggcaccgagcttctggtgtggtacaatgacagctatacgtctttctttgggatc
cccttacaatgcattgcccaggatgaaaacttaaacgtcccttcaactgtaatggaagcc
atgtgccgacaagacaccctgcagcccttcaacaagagcagcaaactctcccccgccacc
cagcagcgctccgtggtattcccacagactccgtgcagcaggaacttctccctcctggat
aagtctgggcccattgaatcaggatttaaccaaatcaacgtgaaaaaccagcgggtcctc
gccagcccgacttccacgagccagctccactcggagttcagtgactggcatctctggaaa
tgcgggcagtgctttaagactttcacgcagcggatcctcctccagatgcacgtgtgcacg
cagaacccggacagaccctatcaatgtggccactgctcccagtccttttcccagccttct
gaactgaggaaccacgtggtcactcactccagtgaccggcctttcaagtgcggctactgt
ggccgtgcctttgccggagccaccaccctcaacaaccatatccgaacccacactggagaa
aaacccttcaagtgcgagaggtgtgagaggagcttcacgcaggccacccagctgagccga
caccagcggatgcccaatgagtgcaagccaataacggagagcccagaatcaatcgaagtg
gattaa
DBGET
integrated database retrieval system
