KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101961861
Entry
101961861         CDS       T10664                                 
Symbol
Irf3
Name
(RefSeq) interferon regulatory factor 3 isoform X1
  KO
K05411  interferon regulatory factor 3
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04620  Toll-like receptor signaling pathway
iti04621  NOD-like receptor signaling pathway
iti04622  RIG-I-like receptor signaling pathway
iti04623  Cytosolic DNA-sensing pathway
iti04936  Alcoholic liver disease
iti05133  Pertussis
iti05135  Yersinia infection
iti05160  Hepatitis C
iti05161  Hepatitis B
iti05162  Measles
iti05163  Human cytomegalovirus infection
iti05164  Influenza A
iti05165  Human papillomavirus infection
iti05167  Kaposi sarcoma-associated herpesvirus infection
iti05168  Herpes simplex virus 1 infection
iti05169  Epstein-Barr virus infection
iti05170  Human immunodeficiency virus 1 infection
iti05171  Coronavirus disease - COVID-19
iti05203  Viral carcinogenesis
iti05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:iti00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    101961861 (Irf3)
   04621 NOD-like receptor signaling pathway
    101961861 (Irf3)
   04622 RIG-I-like receptor signaling pathway
    101961861 (Irf3)
   04623 Cytosolic DNA-sensing pathway
    101961861 (Irf3)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    101961861 (Irf3)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    101961861 (Irf3)
   05161 Hepatitis B
    101961861 (Irf3)
   05160 Hepatitis C
    101961861 (Irf3)
   05171 Coronavirus disease - COVID-19
    101961861 (Irf3)
   05164 Influenza A
    101961861 (Irf3)
   05162 Measles
    101961861 (Irf3)
   05168 Herpes simplex virus 1 infection
    101961861 (Irf3)
   05163 Human cytomegalovirus infection
    101961861 (Irf3)
   05167 Kaposi sarcoma-associated herpesvirus infection
    101961861 (Irf3)
   05169 Epstein-Barr virus infection
    101961861 (Irf3)
   05165 Human papillomavirus infection
    101961861 (Irf3)
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    101961861 (Irf3)
   05133 Pertussis
    101961861 (Irf3)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    101961861 (Irf3)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    101961861 (Irf3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:iti03000]
    101961861 (Irf3)
   04131 Membrane trafficking [BR:iti04131]
    101961861 (Irf3)
Transcription factors [BR:iti03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    101961861 (Irf3)
Membrane trafficking [BR:iti04131]
 Autophagy
  Other autophagy associated proteins
   TRIM-directed selective autophagy
    101961861 (Irf3)
SSDB
Motif
Pfam: IRF-3 IRF
Other DBs
NCBI-GeneID: 101961861
NCBI-ProteinID: XP_021589862
LinkDB
Position
Unknown
AA seq 420 aa
MGTQKPRILPWLVSQLDLGQLEGVAWLDESRKRFRIPWKHGLRQDAQQEDFGIFQAWAEA
SGAYTPGKDKPDLPTWKRNFRSALNRKEVLRLAEDRSKDPHDPHKIYEFVSTGTGDFSQV
DTSPDTSGGGSTSDTQEDILELLNDMILAPAPDTGPPGLGVVPEHCSQLLLSPNLENPMP
CPNLAPPENPLKRLLVPEEQWEYEVTAFYRGRQVFQKTKFCPGGLRLVGSEAGDRTLSGQ
PITLPDPGVSLTDRGVVGYVKRVLSCLGGGLALWRSGQRLWARRLGHSHAYWAVGEELFP
DNGHGHDGEVPKDNDGVVFDLGPFVADLISFMEGSRRSPRYTLWFCIGESWPQDKPWVKR
LVMVKVVPTCLRALLDMARSGGASSLENTIDLHISNSHPLSLTSDQYKAYLQDLVEDMDF
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgggaacccaaaagccgcgaatcttgccctggctggtgtcgcagctggacctggggcaa
ctggagggtgtggcctggctggacgagagccgcaagcgcttccgcataccctggaagcac
ggcctgcgacaggacgcgcagcaggaagacttcggcatctttcaggcctgggcggaggcc
agtggtgcctacactcctgggaaggataaacctgacctgccgacctggaagaggaatttt
cggtctgccctgaatcggaaggaagtgttgcgtttagctgaggatcggagcaaggacccc
cacgaccctcataagatctatgagtttgtgagcacaggaactggggacttttcccaggtt
gatacctctccagacaccagtggtggaggcagtacctcagacacccaggaagacatcttg
gagttactcaatgacatgatcttggccccagccccagatacgggccccccaggtttgggt
gtggtccctgagcactgctctcagctcttgttgagccccaacttggaaaaccccatgccc
tgtccaaacctggcacctcctgaaaacccactaaagcgactgttggtacctgaagaacag
tgggagtatgaagtgactgccttctaccggggccgccaagtcttccagaagaccaaattc
tgcccagggggcctacggctagtgggctcagaagctggggacaggacactatctggacag
ccaataacattgccagaccctggggtttccctgacagacagaggagtggtgggctatgtg
aaacgtgtacttagctgcctaggagggggactggcactctggcggtcagggcagagactc
tgggcccgccggctggggcacagccatgcatactgggctgtgggcgaggagctgttccct
gacaatgggcatgggcatgatggtgaagtccccaaggacaacgatggagttgtgttcgac
ttggggccctttgtggcagatctgatttccttcatggaaggaagcagacggtcaccacga
tacaccctgtggttctgcataggggagtcatggccgcaggacaagccatgggtgaagagg
cttgtgatggtcaaggtggtacccacatgcctcagggccctgttggacatggcccgatca
gggggtgcctcctcactggagaataccatagacctacacatttccaacagccaccccctc
tccctcacctccgaccagtacaaggcctacctacaggacctggttgaggacatggatttc
tag

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