KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101964913
Entry
101964913         CDS       T10664                                 
Symbol
Tnf
Name
(RefSeq) tumor necrosis factor
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti01523  Antifolate resistance
iti04010  MAPK signaling pathway
iti04060  Cytokine-cytokine receptor interaction
iti04061  Viral protein interaction with cytokine and cytokine receptor
iti04064  NF-kappa B signaling pathway
iti04071  Sphingolipid signaling pathway
iti04150  mTOR signaling pathway
iti04210  Apoptosis
iti04217  Necroptosis
iti04350  TGF-beta signaling pathway
iti04380  Osteoclast differentiation
iti04612  Antigen processing and presentation
iti04620  Toll-like receptor signaling pathway
iti04621  NOD-like receptor signaling pathway
iti04622  RIG-I-like receptor signaling pathway
iti04625  C-type lectin receptor signaling pathway
iti04640  Hematopoietic cell lineage
iti04650  Natural killer cell mediated cytotoxicity
iti04657  IL-17 signaling pathway
iti04660  T cell receptor signaling pathway
iti04664  Fc epsilon RI signaling pathway
iti04668  TNF signaling pathway
iti04920  Adipocytokine signaling pathway
iti04930  Type II diabetes mellitus
iti04931  Insulin resistance
iti04932  Non-alcoholic fatty liver disease
iti04933  AGE-RAGE signaling pathway in diabetic complications
iti04936  Alcoholic liver disease
iti04940  Type I diabetes mellitus
iti05010  Alzheimer disease
iti05014  Amyotrophic lateral sclerosis
iti05020  Prion disease
iti05022  Pathways of neurodegeneration - multiple diseases
iti05132  Salmonella infection
iti05133  Pertussis
iti05134  Legionellosis
iti05135  Yersinia infection
iti05140  Leishmaniasis
iti05142  Chagas disease
iti05143  African trypanosomiasis
iti05144  Malaria
iti05145  Toxoplasmosis
iti05146  Amoebiasis
iti05152  Tuberculosis
iti05160  Hepatitis C
iti05161  Hepatitis B
iti05163  Human cytomegalovirus infection
iti05164  Influenza A
iti05165  Human papillomavirus infection
iti05166  Human T-cell leukemia virus 1 infection
iti05168  Herpes simplex virus 1 infection
iti05169  Epstein-Barr virus infection
iti05170  Human immunodeficiency virus 1 infection
iti05171  Coronavirus disease - COVID-19
iti05205  Proteoglycans in cancer
iti05310  Asthma
iti05321  Inflammatory bowel disease
iti05322  Systemic lupus erythematosus
iti05323  Rheumatoid arthritis
iti05330  Allograft rejection
iti05332  Graft-versus-host disease
iti05410  Hypertrophic cardiomyopathy
iti05414  Dilated cardiomyopathy
iti05417  Lipid and atherosclerosis
iti05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:iti00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    101964913 (Tnf)
   04350 TGF-beta signaling pathway
    101964913 (Tnf)
   04064 NF-kappa B signaling pathway
    101964913 (Tnf)
   04668 TNF signaling pathway
    101964913 (Tnf)
   04071 Sphingolipid signaling pathway
    101964913 (Tnf)
   04150 mTOR signaling pathway
    101964913 (Tnf)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    101964913 (Tnf)
   04061 Viral protein interaction with cytokine and cytokine receptor
    101964913 (Tnf)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    101964913 (Tnf)
   04217 Necroptosis
    101964913 (Tnf)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    101964913 (Tnf)
   04620 Toll-like receptor signaling pathway
    101964913 (Tnf)
   04621 NOD-like receptor signaling pathway
    101964913 (Tnf)
   04622 RIG-I-like receptor signaling pathway
    101964913 (Tnf)
   04625 C-type lectin receptor signaling pathway
    101964913 (Tnf)
   04650 Natural killer cell mediated cytotoxicity
    101964913 (Tnf)
   04612 Antigen processing and presentation
    101964913 (Tnf)
   04660 T cell receptor signaling pathway
    101964913 (Tnf)
   04657 IL-17 signaling pathway
    101964913 (Tnf)
   04664 Fc epsilon RI signaling pathway
    101964913 (Tnf)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    101964913 (Tnf)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    101964913 (Tnf)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    101964913 (Tnf)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    101964913 (Tnf)
   05170 Human immunodeficiency virus 1 infection
    101964913 (Tnf)
   05161 Hepatitis B
    101964913 (Tnf)
   05160 Hepatitis C
    101964913 (Tnf)
   05171 Coronavirus disease - COVID-19
    101964913 (Tnf)
   05164 Influenza A
    101964913 (Tnf)
   05168 Herpes simplex virus 1 infection
    101964913 (Tnf)
   05163 Human cytomegalovirus infection
    101964913 (Tnf)
   05169 Epstein-Barr virus infection
    101964913 (Tnf)
   05165 Human papillomavirus infection
    101964913 (Tnf)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    101964913 (Tnf)
   05135 Yersinia infection
    101964913 (Tnf)
   05133 Pertussis
    101964913 (Tnf)
   05134 Legionellosis
    101964913 (Tnf)
   05152 Tuberculosis
    101964913 (Tnf)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    101964913 (Tnf)
   05144 Malaria
    101964913 (Tnf)
   05145 Toxoplasmosis
    101964913 (Tnf)
   05140 Leishmaniasis
    101964913 (Tnf)
   05142 Chagas disease
    101964913 (Tnf)
   05143 African trypanosomiasis
    101964913 (Tnf)
  09163 Immune disease
   05310 Asthma
    101964913 (Tnf)
   05322 Systemic lupus erythematosus
    101964913 (Tnf)
   05323 Rheumatoid arthritis
    101964913 (Tnf)
   05321 Inflammatory bowel disease
    101964913 (Tnf)
   05330 Allograft rejection
    101964913 (Tnf)
   05332 Graft-versus-host disease
    101964913 (Tnf)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    101964913 (Tnf)
   05014 Amyotrophic lateral sclerosis
    101964913 (Tnf)
   05020 Prion disease
    101964913 (Tnf)
   05022 Pathways of neurodegeneration - multiple diseases
    101964913 (Tnf)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    101964913 (Tnf)
   05418 Fluid shear stress and atherosclerosis
    101964913 (Tnf)
   05410 Hypertrophic cardiomyopathy
    101964913 (Tnf)
   05414 Dilated cardiomyopathy
    101964913 (Tnf)
  09167 Endocrine and metabolic disease
   04930 Type II diabetes mellitus
    101964913 (Tnf)
   04940 Type I diabetes mellitus
    101964913 (Tnf)
   04936 Alcoholic liver disease
    101964913 (Tnf)
   04932 Non-alcoholic fatty liver disease
    101964913 (Tnf)
   04931 Insulin resistance
    101964913 (Tnf)
   04933 AGE-RAGE signaling pathway in diabetic complications
    101964913 (Tnf)
  09176 Drug resistance: antineoplastic
   01523 Antifolate resistance
    101964913 (Tnf)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:iti04052]
    101964913 (Tnf)
   00536 Glycosaminoglycan binding proteins [BR:iti00536]
    101964913 (Tnf)
Cytokines and neuropeptides [BR:iti04052]
 Cytokines
  Tumor necrosis fators
   101964913 (Tnf)
Glycosaminoglycan binding proteins [BR:iti00536]
 Heparan sulfate / Heparin
  Cytokines
   101964913 (Tnf)
SSDB
Motif
Pfam: TNF DUF956
Other DBs
NCBI-GeneID: 101964913
NCBI-ProteinID: XP_005339069
UniProt: I3MJZ3
LinkDB
Position
Unknown
AA seq 233 aa
MSTESMIRDVELAEEALPKKAWGPQGSSRCLCLSLFSFLLVAGATTLFCLLHFGVIGPQR
EEFLNNLPLGPQAQMLTLRSSSQNMNDKPVAHVVAKNEDKEQLVWLSRRANALLANGMEL
IDNQLVVPANGLYLVYSQVLFKGQGCPSYVLLTHTVSRFAVSYQDKVNLLSAIKSPCPKE
SLEGAEFKPWYEPIYLGGVFELQKGDRLSAEVNLPSYLDFAESGQVYFGVIAL
NT seq 702 nt   +upstreamnt  +downstreamnt
atgagcactgaaagcatgatccgggacgtggagctggccgaggaggcactccccaagaag
gcatgggggccccagggctccagtcggtgcctgtgcctcagcctcttctccttcctgctt
gtggcaggagccactacgctcttctgcctgctgcactttggagtgatcggcccccagagg
gaagagttcctgaataacctccctctcggcccccaggcccagatgctcacactcagatca
tcttctcaaaacatgaatgacaagcctgtagcccacgttgtagcaaaaaatgaagacaag
gagcagctggtgtggctaagtcgtcgtgccaatgccctcctggccaatggcatggagctg
atagacaaccagctggtggtgcctgcaaatgggctatacctcgtctactcccaggtcctc
ttcaagggccaaggctgcccctcctacgtgctcctcacccacactgtcagccgctttgct
gtctcttatcaggataaggtcaacctcctctctgccatcaagagcccctgcccaaaggag
agcctggagggggctgagttcaagccctggtatgaacccatctatctgggaggggtcttc
gagctgcagaagggtgatcgactcagtgctgaggtcaacctgcccagctatctcgacttt
gctgagtccgggcaggtctactttggggtcattgctctgtga

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