Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101965730
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Entry
101965730 CDS
T10664
Symbol
Psen2
Name
(RefSeq) presenilin-2 isoform X5
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04330
Notch signaling pathway
iti04722
Neurotrophin signaling pathway
iti05010
Alzheimer disease
iti05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
101965730 (Psen2)
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
101965730 (Psen2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
101965730 (Psen2)
05022 Pathways of neurodegeneration - multiple diseases
101965730 (Psen2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
iti01002
]
101965730 (Psen2)
Peptidases and inhibitors [BR:
iti01002
]
Aspartic peptidases
Family A22: presenilin family
101965730 (Psen2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
101965730
NCBI-ProteinID:
XP_005326604
UniProt:
I3N481
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MLTFMASDSDEEVCNERTSLMSAESPTPRSCQEGRQGLEDGENTAQWRSQDSEEDCEEDP
DHYDCSAVPGRPPGLEEELTLKYGAKHVIMLFVPVTLCMIVVVATIKSVRFYTEKNGQLI
YTPFTEDTPSVGQRLLNSVLNTLIMISVIVVMTIFLVVLYKYRCYKFIHGWLIMSSLMLL
FLFTYIYLGEVLKTYNVAMDYPTLFLTVWNFGAVGMVCIHWKGPLVLQQAYLIMISALMA
LVFIKYLPEWSAWVILGAISVYDLVAVLCPKGPLRMLVETAQERNEPIFPALIYSSAMVW
TVGMAKLDPSSQGALQLPYDPEMEEDSYDSFGEPSYPEVFEPHLPGYPGEELEEEEERGV
KLGLGDFIFYSVLVGKAAATGSGDWNTTLACFVAILIGLCLTLLLLAVFKKALPALPISI
TFGLIFYFSTDNLVRPFMDTLASHQLYI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgctcacattcatggcctctgacagcgacgaagaagtgtgcaatgagcggacatccctg
atgtcagccgagagtcctacaccgcgctcctgccaggagggcaggcaggggctggaggat
ggagagaacactgcccagtggaggagccaagatagcgaggaggactgcgaggaggaccct
gaccactatgactgcagcgcggtccctggacggccaccaggcctggaggaagagctgacc
ctcaaatatggggctaagcacgttatcatgctgtttgtgcctgtcacactgtgcatgatt
gtcgtggtggctaccatcaagtccgtgcgcttctacacagagaagaatggacagctcatc
tacactcccttcaccgaggacactccctcagtgggccagcgcctcctcaactctgtgctg
aacaccctcatcatgatcagtgtcatcgtggtcatgaccatcttcctggtggtgctgtac
aagtaccgctgctacaagttcatccacggctggttgatcatgtcctctctgatgttgctg
ttcctattcacttacatctacctcggagaagtgctcaagacctacaatgtggccatggac
taccctactctcttcctgactgtctggaacttcggggcagtaggcatggtgtgcatccac
tggaagggccccctggtgctgcagcaggcctacctcatcatgatcagtgccctcatggcc
ttggtattcatcaagtacctcccagagtggtctgcgtgggtcatcctgggtgccatctct
gtgtatgatcttgtggctgtgttatgtcctaaagggccactgagaatgctggtggaaact
gcccaggagaggaatgaacccatatttcctgccttgatatactcatccgccatggtgtgg
acagtgggcatggcaaagctggacccctcctctcagggagccctccagcttccctacgac
ccggagatggaagaagactcctatgacagttttggggagccctcatatcctgaagtcttt
gaaccccacctgcctggctacccgggggaggagctggaagaagaagaggaaaggggtgtg
aagcttggcctgggagacttcatcttctacagtgtgctggtaggcaaggcggcggccaca
ggcagcggggactggaacaccacactggcctgttttgtcgctatcctcattggtttatgt
ctcaccctcctgctgctcgccgtgttcaagaaagcgctgcccgccctccccatctccatc
acctttgggctcatcttctacttctccactgacaacctggtgcgccctttcatggacacc
ttggcctcccaccagctctacatctga
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