Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101966484
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Entry
101966484 CDS
T10664
Name
(RefSeq) HLA class I histocompatibility antigen, B alpha chain-like isoform X4
KO
K06751
MHC class I antigen
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04144
Endocytosis
iti04145
Phagosome
iti04218
Cellular senescence
iti04514
Cell adhesion molecules
iti04612
Antigen processing and presentation
iti04940
Type I diabetes mellitus
iti05163
Human cytomegalovirus infection
iti05165
Human papillomavirus infection
iti05166
Human T-cell leukemia virus 1 infection
iti05167
Kaposi sarcoma-associated herpesvirus infection
iti05168
Herpes simplex virus 1 infection
iti05169
Epstein-Barr virus infection
iti05170
Human immunodeficiency virus 1 infection
iti05203
Viral carcinogenesis
iti05320
Autoimmune thyroid disease
iti05330
Allograft rejection
iti05332
Graft-versus-host disease
iti05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101966484
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101966484
04145 Phagosome
101966484
09143 Cell growth and death
04218 Cellular senescence
101966484
09150 Organismal Systems
09151 Immune system
04650 Natural killer cell mediated cytotoxicity
101966484
04612 Antigen processing and presentation
101966484
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
101966484
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
101966484
05170 Human immunodeficiency virus 1 infection
101966484
05168 Herpes simplex virus 1 infection
101966484
05163 Human cytomegalovirus infection
101966484
05167 Kaposi sarcoma-associated herpesvirus infection
101966484
05169 Epstein-Barr virus infection
101966484
05165 Human papillomavirus infection
101966484
09163 Immune disease
05320 Autoimmune thyroid disease
101966484
05330 Allograft rejection
101966484
05332 Graft-versus-host disease
101966484
09166 Cardiovascular disease
05416 Viral myocarditis
101966484
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
101966484
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
iti04147
]
101966484
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
iti00537
]
101966484
Exosome [BR:
iti04147
]
Exosomal proteins
Proteins found in most exosomes
101966484
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
iti00537
]
Antigens
101966484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
MHC_I_C
Ig_3
ig
C2-set_3
Psg1
Insulin_TMD
Rv3627c_N
Orf78
Motif
Other DBs
NCBI-GeneID:
101966484
NCBI-ProteinID:
XP_013220005
UniProt:
A0A287DB12
LinkDB
All DBs
Position
Unknown
AA seq
333 aa
AA seq
DB search
MYFYTSVSRPGGEPRFISVGYVDDTQFVRFDSDAENPRMEPRAPWIEQEGPEYWERNTRN
AKRQAQTDRRSLNTLRGYYNQSAGGSHTVQHMYGCDVGTDGRLLRGYVQIAYDGGDYIAL
NEDLRSWTAADTAAQITRRKWEAAGVAEQERAYLEVRCVEWLLRYLENGKESLRRTDPPK
MHVTHHPRPKGDVTLRCWALGFYPKEITLNWQRDGEDQTQDMELVETRPAGDRNFQKWAA
VVVPAGEEQRYTCHVHHEGLPEPLTLRWEPPPQSTITIMGIVAAVIVLVVTGAVVYFVMG
KKKNTGVKKGHYTPAVCNDSAQGSDVSLTAEKV
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtatttctacacctccgtgtccaggcccggcggggagccccgcttcatctccgtgggc
tacgtggacgacacgcagttcgtgcgcttcgacagcgacgccgagaatcccaggatggag
cctcgggcgccttggatagagcaggaggggcccgagtactgggagcggaacacacgtaac
gccaagagacaggcacagactgaccgaaggagcctcaacaccctgcgcggctactacaac
cagagcgcgggcggctctcacaccgtccagcacatgtatggctgcgacgtggggaccgac
gggcgcctgctccgcgggtatgttcagatagcctacgacggcggggactacatcgccctg
aacgaggacctgcgctcctggaccgcggccgacacggcggctcagatcacccggcggaag
tgggaggcggccggtgtcgctgagcaagagagggcctacctggaggttcgctgtgtggag
tggctcctcagatacctggagaacgggaaggagtcgctgaggcgcacagaccccccaaag
atgcatgtgactcaccaccctaggcctaaaggagatgtcactctgaggtgctgggcactg
ggcttctaccctaaggagatcaccctgaactggcaacgagatggggaggaccagacccag
gacatggaacttgtggagaccaggcctgcaggggatagaaacttccagaaatgggcagct
gtggtggtgcctgctggagaggagcagagatacacctgccatgtgcaccatgaggggctg
cctgagccactcaccctgagatgggagccaccccctcagtccaccatcaccatcatggga
attgttgctgctgtgattgtccttgttgtcactggagctgtggtctattttgtcatgggg
aagaagaaaaacacaggtgtaaagaaagggcactatactccagctgtctgtaatgacagt
gcccagggctctgatgtgtctctcactgctgagaaagtgtga
DBGET
integrated database retrieval system