KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101966484
Entry
101966484         CDS       T10664                                 
Name
(RefSeq) HLA class I histocompatibility antigen, B alpha chain-like isoform X4
  KO
K06751  MHC class I antigen
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04144  Endocytosis
iti04145  Phagosome
iti04218  Cellular senescence
iti04514  Cell adhesion molecules
iti04612  Antigen processing and presentation
iti04940  Type I diabetes mellitus
iti05163  Human cytomegalovirus infection
iti05165  Human papillomavirus infection
iti05166  Human T-cell leukemia virus 1 infection
iti05167  Kaposi sarcoma-associated herpesvirus infection
iti05168  Herpes simplex virus 1 infection
iti05169  Epstein-Barr virus infection
iti05170  Human immunodeficiency virus 1 infection
iti05203  Viral carcinogenesis
iti05320  Autoimmune thyroid disease
iti05330  Allograft rejection
iti05332  Graft-versus-host disease
iti05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:iti00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    101966484
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    101966484
   04145 Phagosome
    101966484
  09143 Cell growth and death
   04218 Cellular senescence
    101966484
 09150 Organismal Systems
  09151 Immune system
   04650 Natural killer cell mediated cytotoxicity
    101966484
   04612 Antigen processing and presentation
    101966484
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    101966484
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    101966484
   05170 Human immunodeficiency virus 1 infection
    101966484
   05168 Herpes simplex virus 1 infection
    101966484
   05163 Human cytomegalovirus infection
    101966484
   05167 Kaposi sarcoma-associated herpesvirus infection
    101966484
   05169 Epstein-Barr virus infection
    101966484
   05165 Human papillomavirus infection
    101966484
  09163 Immune disease
   05320 Autoimmune thyroid disease
    101966484
   05330 Allograft rejection
    101966484
   05332 Graft-versus-host disease
    101966484
  09166 Cardiovascular disease
   05416 Viral myocarditis
    101966484
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    101966484
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:iti04147]
    101966484
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:iti00537]
    101966484
Exosome [BR:iti04147]
 Exosomal proteins
  Proteins found in most exosomes
   101966484
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:iti00537]
 Antigens
  101966484
SSDB
Motif
Pfam: MHC_I C1-set MHC_I_C Ig_3 ig C2-set_3 Psg1 Insulin_TMD Rv3627c_N Orf78
Other DBs
NCBI-GeneID: 101966484
NCBI-ProteinID: XP_013220005
UniProt: A0A287DB12
LinkDB
Position
Unknown
AA seq 333 aa
MYFYTSVSRPGGEPRFISVGYVDDTQFVRFDSDAENPRMEPRAPWIEQEGPEYWERNTRN
AKRQAQTDRRSLNTLRGYYNQSAGGSHTVQHMYGCDVGTDGRLLRGYVQIAYDGGDYIAL
NEDLRSWTAADTAAQITRRKWEAAGVAEQERAYLEVRCVEWLLRYLENGKESLRRTDPPK
MHVTHHPRPKGDVTLRCWALGFYPKEITLNWQRDGEDQTQDMELVETRPAGDRNFQKWAA
VVVPAGEEQRYTCHVHHEGLPEPLTLRWEPPPQSTITIMGIVAAVIVLVVTGAVVYFVMG
KKKNTGVKKGHYTPAVCNDSAQGSDVSLTAEKV
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgtatttctacacctccgtgtccaggcccggcggggagccccgcttcatctccgtgggc
tacgtggacgacacgcagttcgtgcgcttcgacagcgacgccgagaatcccaggatggag
cctcgggcgccttggatagagcaggaggggcccgagtactgggagcggaacacacgtaac
gccaagagacaggcacagactgaccgaaggagcctcaacaccctgcgcggctactacaac
cagagcgcgggcggctctcacaccgtccagcacatgtatggctgcgacgtggggaccgac
gggcgcctgctccgcgggtatgttcagatagcctacgacggcggggactacatcgccctg
aacgaggacctgcgctcctggaccgcggccgacacggcggctcagatcacccggcggaag
tgggaggcggccggtgtcgctgagcaagagagggcctacctggaggttcgctgtgtggag
tggctcctcagatacctggagaacgggaaggagtcgctgaggcgcacagaccccccaaag
atgcatgtgactcaccaccctaggcctaaaggagatgtcactctgaggtgctgggcactg
ggcttctaccctaaggagatcaccctgaactggcaacgagatggggaggaccagacccag
gacatggaacttgtggagaccaggcctgcaggggatagaaacttccagaaatgggcagct
gtggtggtgcctgctggagaggagcagagatacacctgccatgtgcaccatgaggggctg
cctgagccactcaccctgagatgggagccaccccctcagtccaccatcaccatcatggga
attgttgctgctgtgattgtccttgttgtcactggagctgtggtctattttgtcatgggg
aagaagaaaaacacaggtgtaaagaaagggcactatactccagctgtctgtaatgacagt
gcccagggctctgatgtgtctctcactgctgagaaagtgtga

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